RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 ALYREFQ86V81 257 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 METTL23Q86XA0 190 aa10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 WDR75Q8IWA0 830 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 BRSK2Q8IWQ3 736 aa10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 THEM5Q8N1Q8 247 aa10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 ATL2Q8NHH9 583 aa10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 DHX58Q96C10 678 aa10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 MCRS1Q96EZ8 462 aa10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 BORCS6Q96GS4 357 aa10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 CORO1BQ9BR76 489 aa10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 RPP25Q9BUL9 199 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 GPR88Q9GZN0 384 aa10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 IKZF4Q9H2S9 585 aa10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 RCOR1Q9UKL0 485 aa10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 ATXN7L1Q9ULK2 861 aaPredicted RBP10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 PCDHA7Q9UN72 937 aa10.56□□□□□ -0.72
HNRNPC-228ENST00000557033 WDFY4Q6ZS81 3184 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 SLC35F4A4IF30 521 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 KPNA7A9QM74 516 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 EIF3DO15371 548 aaKnown RBP eCLIP10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 POLR2DO15514 142 aaKnown RBP10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 PI15O43692 258 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 PRPF6O94906 941 aaKnown RBP10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 ALDH1A3P47895 512 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 ME1P48163 572 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 TUFMP49411 452 aaKnown RBP10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 MRE11P49959 708 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 EPHB3P54753 998 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 STARD6P59095 220 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 SNRPFP62306 86 aaKnown RBP10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 DUSP4Q13115 394 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 BIRC2Q13490 618 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 SURF1Q15526 300 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 SLC5A9Q2M3M2 681 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 SV2CQ496J9 727 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 MAP9Q49MG5 647 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 FAM209AQ5JX71 171 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 LRFN4Q6PJG9 635 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 EFCAB13Q8IY85 973 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 GPD1LQ8N335 351 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 TMEM130Q8N3G9 435 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 ZNF507Q8TCN5 953 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 C2orf15Q8WU43 125 aaKnown RBP10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 ELSPBP1Q96BH3 223 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 PLPPR2Q96GM1 343 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 ZNF560Q96MR9 790 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 KIAA1586Q9HCI6 787 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 ASAH2Q9NR71 780 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 ARHGEF3Q9NR81 526 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 RBAKQ9NYW8 714 aaPredicted RBP10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 CEP72Q9P209 647 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 ASB3Q9Y575 518 aa10.55□□□□□ -0.72
HNRNPC-228ENST00000557033 PVALEFA0A1B0GWK0 134 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 ZNF233A6NK53 670 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 H0Y858 1186 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 VNN2O95498 520 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 FGF19O95750 216 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 OR4Q2P0C623 313 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 ASIC1P78348 528 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 TFAMQ00059 246 aaKnown RBP10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 PRKCQQ04759 706 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 TMEM201Q5SNT2 666 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 RESP18Q5W5W9 173 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 UNC13DQ70J99 1090 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 EPM2AIP1Q7L775 607 aaPredicted RBP10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 LRRC52Q8N7C0 313 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 ING5Q8WYH8 240 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 ATOH1Q92858 354 aaPredicted RBP10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 SAAL1Q96ER3 474 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 PGLYRP2Q96PD5 576 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 SPOCK3Q9BQ16 436 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 CBWD1Q9BRT8 395 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 FGFBP2Q9BYJ0 223 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 LACRTQ9GZZ8 138 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 ZCWPW1Q9H0M4 648 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 PCIF1Q9H4Z3 704 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 ZFP14Q9HCL3 533 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 ITGA11Q9UKX5 1188 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 CA14Q9ULX7 337 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 SIT1Q9Y3P8 196 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 YIPF1Q9Y548 306 aa10.54□□□□□ -0.72
HNRNPC-228ENST00000557033 A0A1W2PQU0 124 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 MTMR11A4FU01 709 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 GOLGA8IPA6NC78 632 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 GOLGA8JA6NMD2 632 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 MOSPD3O75425 235 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 ITGB3P05106 788 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 MYL4P12829 197 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 CEBPBP17676 345 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 CCR2P41597 374 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 RBP5P82980 135 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 PKP1Q13835 747 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 FOXD4L6Q3SYB3 417 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 SLC44A4Q53GD3 710 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 FAM78AQ5JUQ0 283 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 FAM26FQ5R3K3 315 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 TANGO2Q6ICL3 276 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 FOXD4L3Q6VB84 417 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 HDXQ7Z353 690 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 DNAJB7Q7Z6W7 309 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms