RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 NHLH1Q02575 133 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 MAP2K1Q02750 393 aaPredicted RBP4.18□□□□□ -1.74
FOXN3-213ENST00000556916 DDR1Q08345 913 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 FOXF2Q12947 444 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 ANKRD1Q15327 319 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 CYP2A13Q16696 494 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 GEN1Q17RS7 908 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 PGS1Q32NB8 556 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 PABPC1LQ4VXU2 614 aaKnown RBP4.18□□□□□ -1.74
FOXN3-213ENST00000556916 EPHA10Q5JZY3 1008 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 PPP4R3AQ6IN85 833 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 TRIM65Q6PJ69 517 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 GBP6Q6ZN66 633 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 TTC7BQ86TV6 843 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 FMNL3Q8IVF7 1028 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 CCDC83Q8IWF9 413 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 GRAMD1CQ8IYS0 662 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 SH2D3CQ8N5H7 860 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 FITM2Q8N6M3 262 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 CELF5Q8N6W0 485 aaKnown RBP4.18□□□□□ -1.74
FOXN3-213ENST00000556916 CEP112Q8N8E3 955 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 NSUN7Q8NE18 718 aaKnown RBP4.18□□□□□ -1.74
FOXN3-213ENST00000556916 TMIEQ8NEW7 156 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 CTCFLQ8NI51 663 aaPredicted RBP4.18□□□□□ -1.74
FOXN3-213ENST00000556916 TBC1D22AQ8WUA7 517 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 RUFY2Q8WXA3 655 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 HPS3Q969F9 1004 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 BPIFA3Q9BQP9 254 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 CDH19Q9H159 772 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 ALDH8A1Q9H2A2 487 aaPredicted RBP4.18□□□□□ -1.74
FOXN3-213ENST00000556916 ANLNQ9NQW6 1124 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 TMEM74BQ9NUR3 256 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 GNL3LQ9NVN8 582 aaKnown RBP4.18□□□□□ -1.74
FOXN3-213ENST00000556916 ASB6Q9NWX5 421 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 USP16Q9Y5T5 823 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 CYP46A1Q9Y6A2 500 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 MYH6P13533 1939 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 ECM29Q5VYK3 1845 aa4.18□□□□□ -1.74
FOXN3-213ENST00000556916 MYH1P12882 1939 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 MYH2Q9UKX2 1941 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 NEXMIFQ5QGS0 1516 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 A6NNZ2 444 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 H0YHG0 523 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 H3BQF6 201 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 EBAG9O00559 213 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 AP1G1O43747 822 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 KINO60870 393 aaKnown RBP4.17□□□□□ -1.74
FOXN3-213ENST00000556916 ERN1O75460 977 aaKnown RBP4.17□□□□□ -1.74
FOXN3-213ENST00000556916 MCM3P25205 808 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 PSMA5P28066 241 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 HNRNPH1P31943 449 aaKnown RBP4.17□□□□□ -1.74
FOXN3-213ENST00000556916 CCT4P50991 539 aaKnown RBP4.17□□□□□ -1.74
FOXN3-213ENST00000556916 VAV2P52735 878 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 PROK1P58294 105 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 IRX1P78414 480 aaPredicted RBP4.17□□□□□ -1.74
FOXN3-213ENST00000556916 SARNPP82979 210 aaKnown RBP4.17□□□□□ -1.74
FOXN3-213ENST00000556916 NOGQ13253 232 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 NEDD9Q14511 834 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 RAB39AQ14964 217 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 TUBB8Q3ZCM7 444 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 CCDC30Q5VVM6 783 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 ATL3Q6DD88 541 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 FOXR2Q6PJQ5 311 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 SLC4A10Q6U841 1118 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.17□□□□□ -1.74
FOXN3-213ENST00000556916 CCDC73Q6ZRK6 1079 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 C11orf57Q6ZUT1 292 aaPredicted RBP4.17□□□□□ -1.74
FOXN3-213ENST00000556916 DHX40Q8IX18 779 aaKnown RBP4.17□□□□□ -1.74
FOXN3-213ENST00000556916 SRRM1Q8IYB3 904 aaKnown RBP4.17□□□□□ -1.74
FOXN3-213ENST00000556916 CNTROBQ8N137 903 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 TSPYL6Q8N831 410 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 MSANTD4Q8NCY6 345 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 C3orf20Q8ND61 904 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 CNNM3Q8NE01 707 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 IL17RDQ8NFM7 739 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 PLBD2Q8NHP8 589 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 PPP1R35Q8TAP8 253 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 SSH3Q8TE77 659 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 AFAP1L1Q8TED9 768 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 JDP2Q8WYK2 163 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 RGMAQ96B86 450 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 MVB12AQ96EY5 273 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 PTCD3Q96EY7 689 aaKnown RBP4.17□□□□□ -1.74
FOXN3-213ENST00000556916 LRIG1Q96JA1 1093 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 CABS1Q96KC9 395 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 KLHL32Q96NJ5 620 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 LSG1Q9H089 658 aaKnown RBP4.17□□□□□ -1.74
FOXN3-213ENST00000556916 VIPAS39Q9H9C1 493 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 UNKLQ9H9P5 680 aaKnown RBP4.17□□□□□ -1.74
FOXN3-213ENST00000556916 PDE11AQ9HCR9 933 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 SLAMF7Q9NQ25 335 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 IL17RBQ9NRM6 502 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 HYPKQ9NX55 129 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 RNF7Q9UBF6 113 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 ABCF2Q9UG63 623 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 EID1Q9Y6B2 187 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 RIMS2Q9UQ26 1411 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 UGGT1Q9NYU2 1555 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 MON2Q7Z3U7 1717 aa4.17□□□□□ -1.74
FOXN3-213ENST00000556916 ATXN2Q99700 1313 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms