RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 ARID5AQ03989 594 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 GRIK3Q13003 919 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 TUSC3Q13454 348 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 SMAD4Q13485 552 aaKnown RBP5.66□□□□□ -1.5
ATXN3-244ENST00000556898 CUL2Q13617 745 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 MTF1Q14872 753 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 DRAP1Q14919 205 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-244ENST00000556898 UPP1Q16831 310 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 CCDC142Q17RM4 750 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 SGSM1Q2NKQ1 1148 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 WDR72Q3MJ13 1102 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 TMCO4Q5TGY1 634 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 WDR59Q6PJI9 974 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 GLB1LQ6UWU2 654 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 ERMP1Q7Z2K6 904 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 CACNA2D4Q7Z3S7 1137 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 USP37Q86T82 979 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 TMEM173Q86WV6 379 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-244ENST00000556898 DNAAF5Q86Y56 855 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 NT5DC4Q86YG4 428 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 TMEM139Q8IV31 216 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 COLGALT2Q8IYK4 626 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 UBR7Q8N806 425 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 TMEM102Q8N9M5 508 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-244ENST00000556898 OLIG1Q8TAK6 271 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 URGCPQ8TCY9 931 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 FBF1Q8TES7 1133 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 ANP32BQ92688 251 aaKnown RBP5.66□□□□□ -1.5
ATXN3-244ENST00000556898 TOP1MTQ969P6 601 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 HPDLQ96IR7 371 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 B3GALT6Q96L58 329 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 MYRFLQ96LU7 910 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 NT5C1BQ96P26 610 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 YME1L1Q96TA2 773 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 BHLHE41Q9C0J9 482 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-244ENST00000556898 CWH43Q9H720 699 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 RC3H2Q9HBD1 1191 aaKnown RBP5.66□□□□□ -1.5
ATXN3-244ENST00000556898 UBN1Q9NPG3 1134 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 PLCB1Q9NQ66 1216 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 ABHD10Q9NUJ1 306 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 MARCH5Q9NX47 278 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 CEP72Q9P209 647 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 HMGXB4Q9UGU5 601 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 ITGA11Q9UKX5 1188 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 CAPN11Q9UMQ6 739 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 PCDHB4Q9Y5E5 795 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATXN3-244ENST00000556898 SNX9Q9Y5X1 595 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 MRPL42Q9Y6G3 142 aaKnown RBP5.66□□□□□ -1.5
ATXN3-244ENST00000556898 RALGAPA2Q2PPJ7 1873 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 A0A0U1RQJ8 604 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 A0A1W2PQJ5 194 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 PROB1E7EW31 1015 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 C5orf67F2Z3F1 127 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 F8VZ95 297 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 NRP1O14786 923 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 CYP26A1O43174 497 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 ZC3H11AO75152 810 aaKnown RBP eCLIP5.65□□□□□ -1.5
ATXN3-244ENST00000556898 SMNDC1O75940 238 aaKnown RBP eCLIP5.65□□□□□ -1.5
ATXN3-244ENST00000556898 KRT5P13647 590 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 ACAT1P24752 427 aaKnown RBP5.65□□□□□ -1.5
ATXN3-244ENST00000556898 LMO2P25791 158 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 AVPR2P30518 371 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 BMPR1AP36894 532 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 TAF6P49848 677 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 LILRA4P59901 499 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 ZBED6P86452 979 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 CCZ1BP86790 482 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 CCZ1P86791 482 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-244ENST00000556898 RNASELQ05823 741 aaKnown RBP5.65□□□□□ -1.5
ATXN3-244ENST00000556898 DLX2Q07687 328 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-244ENST00000556898 DSC1Q08554 894 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 HYAL1Q12794 435 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 CETN1Q12798 172 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 ADAM15Q13444 863 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 HSP90AA2PQ14568 343 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-244ENST00000556898 CBX2Q14781 532 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-244ENST00000556898 CLUL1Q15846 466 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 ASIC2Q16515 512 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 SOWAHAQ2M3V2 549 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 ZNF394Q53GI3 561 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 FIGNQ5HY92 759 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 ZNF667Q5HYK9 610 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 KIAA0319Q5VV43 1072 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 TAF3Q5VWG9 929 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 RAD9BQ6WBX8 426 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 DSTYKQ6XUX3 929 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 TAS1R1Q7RTX1 841 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 LRRC8AQ8IWT6 810 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 ABI1Q8IZP0 508 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 C17orf53Q8N3J3 647 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-244ENST00000556898 SHKBP1Q8TBC3 707 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 SLC20A1Q8WUM9 679 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 KBTBD7Q8WVZ9 684 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 ATRIPQ8WXE1 791 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 CCDC74AQ96AQ1 378 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 ZNF689Q96CS4 500 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-244ENST00000556898 SENP8Q96LD8 212 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 FAM193BQ96PV7 902 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-244ENST00000556898 SPAG5Q96R06 1193 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms