RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 E2F8A0AVK6 867 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 CLDN5O00501 218 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 TRIM24O15164 1050 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 HOXC11O43248 304 aaPredicted RBP9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 SH3BP5O60239 455 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 PRPF6O94906 941 aaKnown RBP9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 YWHAQP27348 245 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 HNRNPDQ14103 355 aaKnown RBP9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 TRIP6Q15654 476 aaKnown RBP9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 DUOXA2Q1HG44 320 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 ANO4Q32M45 955 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 RRAGBQ5VZM2 374 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 EGFLAMQ63HQ2 1017 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 SV2BQ7L1I2 683 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 TRMT11Q7Z4G4 463 aaKnown RBP9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 RABEPKQ7Z6M1 372 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 SLC41A1Q8IVJ1 513 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 BBS7Q8IWZ6 715 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 PNPLA1Q8N8W4 532 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 TERB1Q8NA31 727 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 OR6B3Q8NGW1 331 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 KCNV2Q8TDN2 545 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 OTUB2Q96DC9 234 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 TMX3Q96JJ7 454 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 ACOX2Q99424 681 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 ELOVL4Q9GZR5 314 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 SNX25Q9H3E2 840 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 DPEP3Q9H4B8 488 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 DNAAF2Q9NVR5 837 aaKnown RBP9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 CCDC39Q9UFE4 941 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 CYP8B1Q9UNU6 501 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 SH3BP1Q9Y3L3 701 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 ITPR1Q14643 2758 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 KNL1Q8NG31 2342 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 A0A1W2PQD8 194 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 ZNF233A6NK53 670 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 ZBTB24O43167 697 aaPredicted RBP9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 ZNF217O75362 1048 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 NEFLP07196 543 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 SYPP08247 313 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 FTH1P19P0C7X4 201 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 PTPN1P18031 435 aaKnown RBP9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 NDUFV2P19404 249 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 NTSR1P30989 418 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 SLC14A1Q13336 389 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 ALCAMQ13740 583 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 PLEKHG6Q3KR16 790 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 SOWAHCQ53LP3 525 aaPredicted RBP9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 HECTD3Q5T447 861 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 LARP1BQ659C4 914 aaKnown RBP9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 NUDT18Q6ZVK8 323 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 TRAPPC11Q7Z392 1133 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 BRAPQ7Z569 592 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 PDZD3Q86UT5 571 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 TMEM25Q86YD3 366 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 WDR49Q8IV35 697 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 CHPFQ8IZ52 775 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 RGL4Q8IZJ4 473 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 NUP93Q8N1F7 819 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 ADAMTS14Q8WXS8 1223 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 FBXO32Q969P5 355 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 CLIC6Q96NY7 704 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 KCNK16Q96T55 309 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 B3GNT5Q9BYG0 378 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 CCSER2Q9H7U1 834 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 CD248Q9HCU0 757 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 CD93Q9NPY3 652 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 SPHK2Q9NRA0 654 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 PANK4Q9NVE7 773 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 CHORDC1Q9UHD1 332 aaPredicted RBP9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 PCDHB9Q9Y5E1 797 aa9.59□□□□□ -0.87
HNRNPC-227ENST00000556897 IGSF10Q6WRI0 2623 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 FRMD3A2A2Y4 597 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 A8MXQ7 604 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 KIAA0391O15091 583 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 TACC1O75410 805 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 GJB3O75712 270 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 CD2BP2O95400 341 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 CST3P01034 146 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 DLATP10515 647 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 IRF1P10914 325 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 MAOBP27338 520 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 TNNC1P63316 161 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 RABEP1Q15276 862 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 SURF1Q15526 300 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 COL28A1Q2UY09 1125 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 WDR72Q3MJ13 1102 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 PREPLQ4J6C6 727 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 CCNI2Q6ZMN8 369 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 NAXDQ8IW45 347 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 B3GALNT2Q8NCR0 500 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 GLIS3Q8NEA6 775 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 PDZD8Q8NEN9 1154 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 SCAMP5Q8TAC9 235 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 IPO4Q8TEX9 1081 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 HPS3Q969F9 1004 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 WBP2Q969T9 261 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 CCDC127Q96BQ5 260 aa9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 ZNF419Q96HQ0 510 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-227ENST00000556897 MRGPRX1Q96LB2 322 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms