RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 GREM1O60565 184 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 TLR5O60602 858 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 LETM1O95202 739 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-224ENST00000556737 NFATC1O95644 943 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 MBL2P11226 248 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-224ENST00000556737 CHRM1P11229 460 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-224ENST00000556737 OPRD1P41143 372 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 KIF11P52732 1056 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 ZSCAN23Q3MJ62 389 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 CCDC40Q4G0X9 1142 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 HECTD3Q5T447 861 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 CCDC186Q7Z3E2 898 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 SCD5Q86SK9 330 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 DDX42Q86XP3 938 aaKnown RBP eCLIP10.9□□□□□ -0.66
SHMT2-224ENST00000556737 SYNPOQ8N3V7 929 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 KAT5Q92993 513 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 P2RY13Q9BPV8 354 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 EPC1Q9H2F5 836 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 SEMA4AQ9H3S1 761 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 FBXO44Q9H4M3 255 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 CYLDQ9NQC7 956 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 USP3Q9Y6I4 520 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 EML5Q05BV3 1969 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 WDR87Q6ZQQ6 2873 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 A0A1W2PQH9 124 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 E2F8A0AVK6 867 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 RNF40O75150 1001 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 TBX18O95935 607 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 LMNAP02545 664 aaKnown RBP10.89□□□□□ -0.67
SHMT2-224ENST00000556737 TRIM21P19474 475 aaKnown RBP10.89□□□□□ -0.67
SHMT2-224ENST00000556737 ACO1P21399 889 aaKnown RBP10.89□□□□□ -0.67
SHMT2-224ENST00000556737 CXCL12P48061 93 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 GALK1P51570 392 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 MESP2Q0VG99 397 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 GRSF1Q12849 480 aaKnown RBP eCLIP10.89□□□□□ -0.67
SHMT2-224ENST00000556737 LRMPQ12912 555 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 GOLGA7BQ2TAP0 167 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 RAB41Q5JT25 222 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 BHLHA9Q7RTU4 235 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 C12orf40Q86WS4 652 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 ARHGEF19Q8IW93 802 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 CD101Q93033 1021 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 HEXIM2Q96MH2 286 aaKnown RBP10.89□□□□□ -0.67
SHMT2-224ENST00000556737 FAM126AQ9BYI3 521 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-224ENST00000556737 TLR8Q9NR97 1041 aaKnown RBP10.89□□□□□ -0.67
SHMT2-224ENST00000556737 RWDD2AQ9UIY3 292 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 FAM186AA6NE01 2351 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 GPR179Q6PRD1 2367 aa10.89□□□□□ -0.67
SHMT2-224ENST00000556737 DMXL1Q9Y485 3027 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 ANTXRLA6NF34 631 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 CHURC1-FNTBB4DL54 471 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 TULP2O00295 520 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 O00370 1275 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 P4HA2O15460 535 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 IRF1P10914 325 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 DRD1P21728 446 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 TBXAS1P24557 533 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-224ENST00000556737 ZNF132P52740 706 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 AMPD2Q01433 879 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 DHCR24Q15392 516 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 SASS6Q6UVJ0 657 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 PIGZQ86VD9 579 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 BBS7Q8IWZ6 715 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 ADGRG2Q8IZP9 1017 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 ANKRD52Q8NB46 1076 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 NT5C1BQ96P26 610 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 ZSWIM1Q9BR11 485 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 KLF16Q9BXK1 252 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-224ENST00000556737 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.88□□□□□ -0.67
SHMT2-224ENST00000556737 POLR3BQ9NW08 1133 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-224ENST00000556737 TSPAN16Q9UKR8 245 aa10.88□□□□□ -0.67
SHMT2-224ENST00000556737 SMG5Q9UPR3 1016 aaKnown RBP10.88□□□□□ -0.67
SHMT2-224ENST00000556737 RIF1Q5UIP0 2472 aaKnown RBP10.87□□□□□ -0.67
SHMT2-224ENST00000556737 DCHS1Q96JQ0 3298 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 DNAH14Q0VDD8 3507 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 SLC9A3R1O14745 358 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-224ENST00000556737 XPO1O14980 1071 aaKnown RBP10.87□□□□□ -0.67
SHMT2-224ENST00000556737 MDM4O15151 490 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 GNA14O95837 355 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 AFPP02771 609 aaKnown RBP10.87□□□□□ -0.67
SHMT2-224ENST00000556737 ADH5P11766 374 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 RARGP13631 454 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 HOXA6P31267 233 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 EIF2DP41214 584 aaKnown RBP10.87□□□□□ -0.67
SHMT2-224ENST00000556737 FNTBP49356 437 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 BCAT1P54687 386 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 YWHAEP62258 255 aaKnown RBP10.87□□□□□ -0.67
SHMT2-224ENST00000556737 PDE4CQ08493 712 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 KCNH2Q12809 1159 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 PPP2R5DQ14738 602 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 FBXO43Q4G163 708 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 PKDCCQ504Y2 493 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 KLHDC10Q6PID8 442 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 RHBDF2Q6PJF5 856 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 IRF2BP1Q8IU81 584 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 SFTPA1Q8IWL2 248 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 ETFBKMTQ8IXQ9 262 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 PPM1KQ8N3J5 372 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 PHTF2Q8N3S3 785 aa10.87□□□□□ -0.67
SHMT2-224ENST00000556737 ZNF276Q8N554 614 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms