RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 CLDN5O00501 218 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 TRDMT1O14717 391 aaKnown RBP8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 SLC9A3R1O14745 358 aaPredicted RBP8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 CACNA1HO95180 2353 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 PAPSS2O95340 614 aaPredicted RBP8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 VNN1O95497 513 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 ARSAP15289 507 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 TCF3P15923 654 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 SDHBP21912 280 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 YWHAQP27348 245 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 GJA4P35212 333 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 PSMC2P35998 433 aaKnown RBP8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 RAP1GAPP47736 663 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 FNTBP49356 437 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 DLG4P78352 724 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 NUCB2P80303 420 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 FOXK2Q01167 660 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 TAF10Q12962 218 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 ADAM9Q13443 819 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 CCINQ13939 588 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 GAS6Q14393 721 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 ZACNQ401N2 412 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 FBXO43Q4G163 708 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 TMEM196Q5HYL7 178 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 HEATR6Q6AI08 1181 aaKnown RBP8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 PRR23BQ6ZRT6 265 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 Q6ZS52 159 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 CEP68Q76N32 757 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 SV2AQ7L0J3 742 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 ACOT1Q86TX2 421 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 FAM35AQ86V20 835 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 LONP2Q86WA8 852 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 UNC93AQ86WB7 457 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 FAM186BQ8IYM0 893 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 CCDC26Q8TAB7 109 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 CD101Q93033 1021 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 SMARCD1Q96GM5 515 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 CHAMP1Q96JM3 812 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 SLC22A12Q96S37 553 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 ARID3AQ99856 593 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 P2RY13Q9BPV8 354 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 B3GNT5Q9BYG0 378 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 ZNF518BQ9C0D4 1074 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 GZF1Q9H116 711 aaPredicted RBP8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 DMAP1Q9NPF5 467 aaPredicted RBP8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 GCNT4Q9P109 453 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 HOOK1Q9UJC3 728 aaKnown RBP8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 ARHGAP26Q9UNA1 814 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 SLC8A2Q9UPR5 921 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 MAPK8IP1Q9UQF2 711 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 WNT6Q9Y6F9 365 aa8.16□□□□□ -1.1
HNRNPC-226ENST00000556628 ZNF840PA6NDX5 716 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 LEFTY2O00292 366 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 CETN3O15182 167 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 STX10O60499 249 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 SMC2O95347 1197 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 ADH1CP00326 375 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 ASS1P00966 412 aaKnown RBP8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 HLA-DRAP01903 254 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 FBXO45P0C2W1 286 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 MBL2P11226 248 aaPredicted RBP8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 TDGF1P13385 188 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 GALK1P51570 392 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 NDST1P52848 882 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 ENPEPQ07075 957 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 SIM2Q14190 667 aaPredicted RBP8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 NFKBIBQ15653 356 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 NFIL3Q16649 462 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 EML3Q32P44 896 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 LAIR1Q6GTX8 287 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 FSTL4Q6MZW2 842 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 DCLK2Q8N568 766 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 KIAA1958Q8N8K9 716 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 RIN3Q8TB24 985 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 OVCA2Q8WZ82 227 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 ACDQ96AP0 544 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 TSG101Q99816 390 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 GTPBP4Q9BZE4 634 aaKnown RBP8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 NACA2Q9H009 215 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 SDCBP2Q9H190 292 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 GOLPH3LQ9H4A5 285 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 MMRN2Q9H8L6 949 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 COMMD8Q9NX08 183 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 USP18Q9UMW8 372 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 NME7Q9Y5B8 376 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 CPQQ9Y646 472 aa8.15□□□□□ -1.1
HNRNPC-226ENST00000556628 OTOL1A6NHN0 477 aaPredicted RBP8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 K7ESF4 209 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 AKAP3O75969 853 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 OAS1P00973 400 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 EGFP01133 1207 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 FAM200BP0CF97 657 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 TRIM49P0CI25 452 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 TRIM49CP0CI26 452 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 CCDC192P0DO97 292 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 EPB41P11171 864 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 TIMP2P16035 220 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 ADORA2BP29275 332 aa8.14□□□□□ -1.11
HNRNPC-226ENST00000556628 HOXA6P31267 233 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms