RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 TMEM59LQ9UK28 342 aa11.83□□□□□ -0.52
FOXN3-212ENST00000556541 REXO2Q9Y3B8 237 aaKnown RBP11.83□□□□□ -0.52
FOXN3-212ENST00000556541 PCDHA13Q9Y5I0 950 aa11.83□□□□□ -0.52
FOXN3-212ENST00000556541 ZNF197O14709 1029 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 F11P03951 625 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 CCDC175P0C221 793 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 SSTR3P32745 418 aaPredicted RBP11.82□□□□□ -0.52
FOXN3-212ENST00000556541 RGS7P49802 495 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 NNTQ13423 1086 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 MTF1Q14872 753 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 ACAP1Q15027 740 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 MSANTD2Q6P1R3 559 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 SYCE2Q6PIF2 218 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 FAM183BPQ6ZVS7 135 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 TADA2BQ86TJ2 420 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 GPIHBP1Q8IV16 184 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 DEFB123Q8N688 67 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 KIAA1958Q8N8K9 716 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 SCAMP5Q8TAC9 235 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 KHSRPQ92945 711 aaKnown RBP eCLIP11.82□□□□□ -0.52
FOXN3-212ENST00000556541 FBXO32Q969P5 355 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 ZNF653Q96CK0 615 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 SLC2A13Q96QE2 648 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 NCAPGQ9BPX3 1015 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 ADAM7Q9H2U9 754 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 ASAH2Q9NR71 780 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 ABCC13Q9NSE7 274 aa11.82□□□□□ -0.52
FOXN3-212ENST00000556541 OLA1Q9NTK5 396 aaKnown RBP11.82□□□□□ -0.52
FOXN3-212ENST00000556541 DOCK6Q96HP0 2047 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.81□□□□□ -0.52
FOXN3-212ENST00000556541 CCDC195A0A1B0GUA6 201 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 ZNF840PA6NDX5 716 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 GOLGA6L9A6NEM1 432 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 DPYSL4O14531 572 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 CCP110O43303 1012 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 DAB1O75553 588 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 SOAT2O75908 522 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 OLFM2O95897 454 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 LTFP02788 710 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 SPATA31D3P0C874 917 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 RRM1P23921 792 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 LTBRP36941 435 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 PTPN9P43378 593 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 USP46P62068 366 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 YWHAZP63104 245 aaKnown RBP11.81□□□□□ -0.52
FOXN3-212ENST00000556541 TAF10Q12962 218 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 MAMLD1Q13495 774 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 TAF12Q16514 161 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 PRSS36Q5K4E3 855 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 OR6B2Q6IFH4 312 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 DNAJC24Q6P3W2 148 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 SPATA31D4Q6ZUB0 917 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 BNIPLQ7Z465 357 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 SCD5Q86SK9 330 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 TMEM150AQ86TG1 271 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 SCUBE3Q8IX30 993 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 RNF10Q8N5U6 811 aaKnown RBP11.81□□□□□ -0.52
FOXN3-212ENST00000556541 STKLD1Q8NE28 680 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 GIPC2Q8TF65 315 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 GOLGA1Q92805 767 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 NT5C3BQ969T7 300 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 PGAP3Q96FM1 320 aaPredicted RBP11.81□□□□□ -0.52
FOXN3-212ENST00000556541 NECTIN4Q96NY8 510 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 THAP2Q9H0W7 228 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 S1PR5Q9H228 398 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 POPDC2Q9HBU9 364 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 TRPM5Q9NZQ8 1165 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 CLEC1BQ9P126 229 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 DNMT3BQ9UBC3 853 aaKnown RBP11.81□□□□□ -0.52
FOXN3-212ENST00000556541 TJP2Q9UDY2 1190 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 CNOT8Q9UFF9 292 aaKnown RBP11.81□□□□□ -0.52
FOXN3-212ENST00000556541 BRWD1Q9NSI6 2320 aa11.81□□□□□ -0.52
FOXN3-212ENST00000556541 TMEM191CA6NGB0 347 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 YJEFN3A6XGL0 299 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 E7ENQ6 273 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 CCL16O15467 120 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 ZSCAN12O43309 604 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 TBX10O75333 385 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 TADA3O75528 432 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 RFPL2O75678 378 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 OAS1P00973 400 aaKnown RBP11.8□□□□□ -0.52
FOXN3-212ENST00000556541 RHOP08100 348 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 USP17L7P0C7H9 530 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 RALAP11233 206 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 KRT3P12035 628 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 LCP1P13796 627 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 TCF3P15923 654 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 IGFBP4P22692 258 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 NOS2P35228 1153 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 GTF2F1P35269 517 aaKnown RBP eCLIP11.8□□□□□ -0.52
FOXN3-212ENST00000556541 ARHGAP25P42331 645 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 MATKP42679 507 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 MTHFRP42898 656 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 YWHAGP61981 247 aaKnown RBP eCLIP11.8□□□□□ -0.52
FOXN3-212ENST00000556541 KIF5AQ12840 1032 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 MTA1Q13330 715 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 MTMR3Q13615 1198 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 IFI16Q16666 785 aaKnown RBP11.8□□□□□ -0.52
FOXN3-212ENST00000556541 FAM102AQ5T9C2 384 aaPredicted RBP11.8□□□□□ -0.52
FOXN3-212ENST00000556541 CYP4A22Q5TCH4 519 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms