RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 ANKRD63C9JTQ0 380 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 LCE2BO14633 110 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 IL18RAPO95256 599 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 ADH1CP00326 375 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 ADSSP30520 456 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 NOS2P35228 1153 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 PNPLA4P41247 253 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 ACOT2P49753 483 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 TAF6P49848 677 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 SCAPQ12770 1279 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 POSTNQ15063 836 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 LARP1BQ659C4 914 aaKnown RBP10.74□□□□□ -0.69
SCFD1-220ENST00000556486 ADALQ6DHV7 355 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 PNPLA1Q8N8W4 532 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 SPATA18Q8TC71 538 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 LEO1Q8WVC0 666 aaPredicted RBP10.74□□□□□ -0.69
SCFD1-220ENST00000556486 ACDQ96AP0 544 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 ERLEC1Q96DZ1 483 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 CAMK1GQ96NX5 476 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 SLC22A12Q96S37 553 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 CYP2S1Q96SQ9 504 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 NUSAP1Q9BXS6 441 aaKnown RBP10.74□□□□□ -0.69
SCFD1-220ENST00000556486 ECT2Q9H8V3 914 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 OLFML3Q9NRN5 406 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 TDP1Q9NUW8 608 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 PGPEP1Q9NXJ5 209 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 DPP3Q9NY33 737 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 ABI2Q9NYB9 513 aaPredicted RBP10.74□□□□□ -0.69
SCFD1-220ENST00000556486 ZNF232Q9UNY5 417 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.74□□□□□ -0.69
SCFD1-220ENST00000556486 HRH3Q9Y5N1 445 aa10.74□□□□□ -0.69
SCFD1-220ENST00000556486 KPNA7A9QM74 516 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 TISP43B9A030 160 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 CYB561D2O14569 222 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 KRT18P05783 430 aaKnown RBP10.73□□□□□ -0.69
SCFD1-220ENST00000556486 HAPLN1P10915 354 aaPredicted RBP10.73□□□□□ -0.69
SCFD1-220ENST00000556486 HMGA1P17096 107 aaKnown RBP10.73□□□□□ -0.69
SCFD1-220ENST00000556486 DDX6P26196 483 aaKnown RBP eCLIP10.73□□□□□ -0.69
SCFD1-220ENST00000556486 NLRP12P59046 1061 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 CUL4AQ13619 759 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 SV2CQ496J9 727 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 ZC2HC1CQ53FD0 456 aaPredicted RBP10.73□□□□□ -0.69
SCFD1-220ENST00000556486 LRRTM3Q86VH5 581 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 METTL23Q86XA0 190 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 EFCAB13Q8IY85 973 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 THEM5Q8N1Q8 247 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 CPA6Q8N4T0 437 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 CXorf38Q8TB03 319 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 MDM1Q8TC05 714 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 ZDHHC1Q8WTX9 485 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 DNAJC19Q96DA6 116 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 IFT43Q96FT9 208 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 CRELD1Q96HD1 420 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 FRMD6Q96NE9 622 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 FNBP1Q96RU3 617 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 LINC00597Q9H2U6 94 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 ABCB6Q9NP58 842 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 DUS2Q9NX74 493 aaKnown RBP10.73□□□□□ -0.69
SCFD1-220ENST00000556486 AK5Q9Y6K8 562 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 PCNX2A6NKB5 2137 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 PI4KAP42356 2102 aa10.73□□□□□ -0.69
SCFD1-220ENST00000556486 ASH1LQ9NR48 2969 aaKnown RBP10.72□□□□□ -0.69
SCFD1-220ENST00000556486 FRMD3A2A2Y4 597 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 SIAH2O43255 324 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 F11P03951 625 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 PRB1P04280 392 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 CAPNS1P04632 268 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 GAP43P17677 238 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 ITPKAP23677 461 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 MESP2Q0VG99 397 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 ALCAMQ13740 583 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 DHX8Q14562 1220 aaKnown RBP10.72□□□□□ -0.69
SCFD1-220ENST00000556486 ZNF268Q14587 947 aaPredicted RBP10.72□□□□□ -0.69
SCFD1-220ENST00000556486 MTF1Q14872 753 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 NFE2Q16621 373 aaPredicted RBP10.72□□□□□ -0.69
SCFD1-220ENST00000556486 CCDC142Q17RM4 750 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 FBXO43Q4G163 708 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 WSCD1Q658N2 575 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 USP49Q70CQ1 688 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 PIP4P1Q86T03 277 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 SFR1Q86XK3 245 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 BRSK2Q8IWQ3 736 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 DCP1BQ8IZD4 617 aaKnown RBP10.72□□□□□ -0.69
SCFD1-220ENST00000556486 LRRC52Q8N7C0 313 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 RASSF8Q8NHQ8 419 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 USP33Q8TEY7 942 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 TRMT2BQ96GJ1 504 aaKnown RBP10.72□□□□□ -0.69
SCFD1-220ENST00000556486 EPSTI1Q96J88 318 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 LRIG1Q96JA1 1093 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 MYRFLQ96LU7 910 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 ZNF560Q96MR9 790 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 PKMYT1Q99640 499 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 ACBD6Q9BR61 282 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 PYM1Q9BRP8 204 aaKnown RBP10.72□□□□□ -0.69
SCFD1-220ENST00000556486 PI4K2AQ9BTU6 479 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 KIF9Q9HAQ2 790 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 TMLHEQ9NVH6 421 aa10.72□□□□□ -0.69
SCFD1-220ENST00000556486 FBXO2Q9UK22 296 aaPredicted RBP10.72□□□□□ -0.69
SCFD1-220ENST00000556486 SRPRBQ9Y5M8 271 aaKnown RBP10.72□□□□□ -0.69
SCFD1-220ENST00000556486 FLNBO75369 2602 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms