RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 STOX1Q6ZVD7 989 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 OVCH2Q7RTZ1 564 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 CXorf67Q86X51 503 aaPredicted RBP5.67□□□□□ -1.5
SRP54-211ENST00000556445 OR2C3Q8N628 320 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 NECAB1Q8N987 351 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 ZBTB34Q8NCN2 500 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 CLRN3Q8NCR9 226 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 TBC1D22AQ8WUA7 517 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 WASF1Q92558 559 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 HVCN1Q96D96 273 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 HIST1H2AHQ96KK5 128 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 RIPOR3Q96MK2 946 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 ZNF396Q96N95 335 aaPredicted RBP5.67□□□□□ -1.5
SRP54-211ENST00000556445 HIST1H2AJQ99878 128 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 BRIP1Q9BX63 1249 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 SLC26A6Q9BXS9 759 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 CRNKL1Q9BZJ0 848 aaKnown RBP5.67□□□□□ -1.5
SRP54-211ENST00000556445 IL23AQ9NPF7 189 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 ATP8A2Q9NTI2 1148 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 ANKEF1Q9NU02 776 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 C14orf119Q9NWQ9 140 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 NKIRAS2Q9NYR9 191 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 TFCP2L1Q9NZI6 479 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 ABCF2Q9UG63 623 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 CFAP45Q9UL16 551 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 TMPRSS11EQ9UL52 423 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 ODF2LQ9ULJ1 636 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 MTMR6Q9Y217 621 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 POLHQ9Y253 713 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 PCDHB6Q9Y5E3 794 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 PCDHGB6Q9Y5F9 930 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 MAGED1Q9Y5V3 778 aaPredicted RBP5.67□□□□□ -1.5
SRP54-211ENST00000556445 CHD4Q14839 1912 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 ELP1O95163 1332 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 MAST2Q6P0Q8 1798 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 TIAM2Q8IVF5 1701 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 KIAA1551Q9HCM1 1747 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 KLF18A0A0U1RQI7 1052 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 UBE2QL1A1L167 161 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 PRSS38A1L453 326 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 FSD2A1L4K1 749 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 GOLGA6L4A6NEF3 574 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 CCDC69A6NI79 296 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 RRN3P2A6NIE6 340 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 DAPK3O43293 454 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 MTSS1O43312 755 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 SEC24DO94855 1032 aaPredicted RBP5.66□□□□□ -1.5
SRP54-211ENST00000556445 BAG3O95817 575 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 JUNP05412 331 aaKnown RBP5.66□□□□□ -1.5
SRP54-211ENST00000556445 NPR1P16066 1061 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 PSMA3P25788 255 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 GALNSP34059 522 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 KIR2DL3P43628 341 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 GYG1P46976 350 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 HAND2P61296 217 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 FOXE3Q13461 319 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 LLGL1Q15334 1064 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 NRN1LQ496H8 165 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 BROXQ5VW32 411 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 CCDC149Q6ZUS6 474 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 PDZD4Q76G19 769 aaPredicted RBP5.66□□□□□ -1.5
SRP54-211ENST00000556445 C11orf74Q86VG3 221 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 SGMS1Q86VZ5 419 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 LYSMD2Q8IV50 215 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 LMNTD2Q8IXW0 634 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 CDYL2Q8N8U2 506 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 NSUN7Q8NE18 718 aaKnown RBP5.66□□□□□ -1.5
SRP54-211ENST00000556445 PIK3C3Q8NEB9 887 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 IL17DQ8TAD2 202 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 ESR2Q92731 530 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 SLC5A5Q92911 643 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 FERMT2Q96AC1 680 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 ZNF503Q96F45 646 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 TEKT5Q96M29 485 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 TCEANC2Q96MN5 208 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 FDXACB1Q9BRP7 624 aaPredicted RBP5.66□□□□□ -1.5
SRP54-211ENST00000556445 ARMT1Q9H993 441 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 ZNF287Q9HBT7 754 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 TOPORSQ9NS56 1045 aaPredicted RBP5.66□□□□□ -1.5
SRP54-211ENST00000556445 GPRC5BQ9NZH0 403 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 TMEM98Q9Y2Y6 226 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 TCHHQ07283 1943 aa5.66□□□□□ -1.5
SRP54-211ENST00000556445 TAF1P21675 1872 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 KRTAP23-1A1A580 65 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 KLHL33A6NCF5 533 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 GOLGA8BA8MQT2 603 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 CAPN14A8MX76 684 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 SNAP23O00161 211 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 POLRMTO00411 1230 aaKnown RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 SH2B2O14492 632 aaPredicted RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 IFIT3O14879 490 aaKnown RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 ZBTB43O43298 467 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 XPOTO43592 962 aaKnown RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 AKAP8O43823 692 aaKnown RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 KDM1AO60341 852 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 INMTO95050 263 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 FSBPO95073 299 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 CALM1P0DP23 149 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 CALM2P0DP24 149 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms