RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 DCAF6Q58WW2 860 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 EFCAB12Q6NXP0 572 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 PPHLN1Q8NEY8 458 aaKnown RBP15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 EPAS1Q99814 870 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 PRMT7Q9NVM4 692 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 ANGPT2O15123 496 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 SRP72O76094 671 aaKnown RBP15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 MIPP30301 263 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 DDI1Q8WTU0 396 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 TGM2P21980 687 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 SERPINB8P50452 374 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 HADHBP55084 474 aaKnown RBP15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 SLC1A5Q15758 541 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 MPZL3Q6UWV2 235 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 C12orf56Q8IXR9 622 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 SAMD3Q8N6K7 520 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 ZNF560Q96MR9 790 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 TTC36A6NLP5 189 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 PRPF4O43172 522 aaKnown RBP eCLIP15.54■□□□□ 0.089e-7■■■□□ 14.9
ARHGEF40-207ENST00000556399 SERPINE1P05121 402 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 RAG1P15918 1043 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 EIF4BP23588 611 aaKnown RBP15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 PDAP1Q13442 181 aaKnown RBP15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 SHROOM1Q2M3G4 852 aaPredicted RBP15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 CLNKQ7Z7G1 428 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 STKLD1Q8NE28 680 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 TMEM176AQ96HP8 235 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 SMARCAD1Q9H4L7 1026 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 KCPQ6ZWJ8 1503 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 hCG_1818297A0A087WSY0 165 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 AP3B1O00203 1094 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 NSUN2Q08J23 767 aaKnown RBP eCLIP15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 ZBTB17Q13105 803 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 ITGA9Q13797 1035 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 R3HDM1Q15032 1099 aaKnown RBP15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 DALRD3Q5D0E6 543 aaKnown RBP15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 PHF13Q86YI8 300 aaPredicted RBP15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 EFCAB1Q9HAE3 211 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 ARL8BQ9NVJ2 186 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 SNX5Q9Y5X3 404 aa15.54■□□□□ 0.08
ARHGEF40-207ENST00000556399 RGPD2P0DJD1 1756 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 PROCP04070 461 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 TDRD10Q5VZ19 366 aaKnown RBP15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 NET1Q7Z628 596 aaPredicted RBP15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 RFWD2Q8NHY2 731 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 NAT9Q9BTE0 207 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 SLC17A7Q9P2U7 560 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 LGALS13Q9UHV8 139 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 E2F6O75461 281 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 ITGB5P18084 799 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 HDAC4P56524 1084 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 SGF29Q96ES7 293 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 BCAS3Q9H6U6 928 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 ARHGEF3Q9NR81 526 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 CPSF3Q9UKF6 684 aaKnown RBP15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 MYH2Q9UKX2 1941 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 STRNO43815 780 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 PSMC3P17980 439 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 BST1Q10588 318 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 BLMHQ13867 455 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 SEL1L3Q68CR1 1132 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 SNRNP27Q8WVK2 155 aaKnown RBP15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 CYGBQ8WWM9 190 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 TRAPPC9Q96Q05 1148 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 MAGEB5Q9BZ81 275 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 CCDC90BQ9GZT6 254 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 NSMCE4AQ9NXX6 385 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 PCDHAC2Q9Y5I4 1007 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 SPDYE16A6NNV3 312 aaPredicted RBP15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 C19orf81C9J6K1 198 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 APOA4P06727 396 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 ROR2Q01974 943 aaKnown RBP15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 SPDYE2Q495Y8 402 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 VSTM1Q6UX27 236 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 OPTNQ96CV9 577 aa15.53■□□□□ 0.08
ARHGEF40-207ENST00000556399 GSTT1P30711 240 aa15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 CCNHP51946 323 aaPredicted RBP15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 RIPOR1Q6ZS17 1223 aa15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 ARHGAP22Q7Z5H3 698 aa15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 NCLNQ969V3 563 aa15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 PKD2L2Q9NZM6 624 aa15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 APPL1Q9UKG1 709 aa15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 POLIQ9UNA4 740 aa15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 CYP2F1P24903 491 aa15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 NCKAP1LP55160 1127 aa15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 PLOD1Q02809 727 aaPredicted RBP15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 TWF2Q6IBS0 349 aaKnown RBP15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 STYK1Q6J9G0 422 aa15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 STRA8Q7Z7C7 330 aa15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 ACOT1Q86TX2 421 aa15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 TDRD5Q8NAT2 981 aaKnown RBP15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 APPL2Q8NEU8 664 aa15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 MPP4Q96JB8 637 aa15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 MMP19Q99542 508 aa15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 DDX50Q9BQ39 737 aaKnown RBP15.52■□□□□ 0.08
ARHGEF40-207ENST00000556399 A0A0B4J269 797 aa15.52■□□□□ 0.07
ARHGEF40-207ENST00000556399 ATP5BP06576 529 aaKnown RBP15.52■□□□□ 0.07
ARHGEF40-207ENST00000556399 ANPEPP15144 967 aa15.52■□□□□ 0.07
ARHGEF40-207ENST00000556399 ACADSBP45954 432 aa15.52■□□□□ 0.07
ARHGEF40-207ENST00000556399 SLC25A3Q00325 362 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms