RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	MYO10	Q9HD67	2058 aa		5.12	□□□□□ -1.59
ATXN3-238	ENST00000556288	PRRC2B	Q5JSZ5	2229 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	LCHN	A4D1U4	455 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	TBKBP1	A7MCY6	615 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288		K7ERI5	159 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	PLD2	O14939	933 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	SPTLC2	O15270	562 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	BUB1B	O60566	1050 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	EYA4	O95677	639 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	BMP15	O95972	392 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	ASGR2	P07307	311 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	MED14OS	P0DP75	135 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	NCAM1	P13591	858 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	DARS	P14868	501 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	SFPQ	P23246	707 aa	Known RBP eCLIP	5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	PML	P29590	882 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	HOXC8	P31273	242 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	LONP1	P36776	959 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	ANP32A	P39687	249 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	PRPH	P41219	470 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	ME1	P48163	572 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	RARRES1	P49788	294 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	GATM	P50440	423 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	PEX3	P56589	373 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	GRIN1	Q05586	938 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	MXD4	Q14582	209 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	KARS	Q15046	597 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	ARL6IP4	Q66PJ3	421 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	B3GNT9	Q6UX72	402 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	OTOP3	Q7RTS5	596 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	RPAIN	Q86UA6	219 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	JAZF1	Q86VZ6	243 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	FAM228A	Q86W67	206 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	CDR2L	Q86X02	465 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	IGDCC3	Q8IVU1	814 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	ZBTB8OS	Q8IWT0	167 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	GSTCD	Q8NEC7	633 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	PCDH19	Q8TAB3	1148 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	DEPTOR	Q8TB45	409 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	PHOSPHO2	Q8TCD6	241 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	CPB2	Q96IY4	423 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	EPSTI1	Q96J88	318 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	SIGLEC10	Q96LC7	697 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	USP28	Q96RU2	1077 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	CDX2	Q99626	313 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	RAD9A	Q99638	391 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	YIPF4	Q9BSR8	244 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	TCHP	Q9BT92	498 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	FTHL17	Q9BXU8	183 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	TRIM6	Q9C030	488 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	NT5C3A	Q9H0P0	336 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	ERVK-5	Q9HDB9	667 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	SLC6A20	Q9NP91	592 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	FANCL	Q9NW38	375 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	CFAP45	Q9UL16	551 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	CNOT6	Q9ULM6	557 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	PIN4	Q9Y237	131 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	FAN1	Q9Y2M0	1017 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	PCDHA5	Q9Y5H7	936 aa		5.11	□□□□□ -1.59
ATXN3-238	ENST00000556288	GOLGA6L4	A6NEF3	574 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	NPIPB6	E9PJ23	425 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	MGEA5	O60502	916 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	MAFK	O60675	156 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	HIP1R	O75146	1068 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	TADA3	O75528	432 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	RASGRP1	O95267	797 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	LYPLA2	O95372	231 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	GJB5	O95377	273 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	PLA2G4B	P0C869	781 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	FOSL2	P15408	326 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	CYP11B2	P19099	503 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	GLRA2	P23416	452 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	STAT6	P42226	847 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	COL4A4	P53420	1690 aa	Predicted RBP	5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	RNASEL	Q05823	741 aa	Known RBP	5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	GPM6B	Q13491	265 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	PKP1	Q13835	747 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	SLC39A14	Q15043	492 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	TCEA2	Q15560	299 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	FNDC3B	Q53EP0	1204 aa	Known RBP	5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	TRIM61	Q5EBN2	209 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	EMC4	Q5J8M3	183 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	RINT1	Q6NUQ1	792 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	USP49	Q70CQ1	688 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	SLC24A5	Q71RS6	500 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	SRGAP1	Q7Z6B7	1085 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	ZNF410	Q86VK4	478 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	GPBP1	Q86WP2	473 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	MYCT1	Q8N699	235 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	IGSF22	Q8N9C0	903 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	MCPH1	Q8NEM0	835 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	NOC3L	Q8WTT2	800 aa	Known RBP	5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	STAM	Q92783	540 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	LPP	Q93052	612 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	TOP1MT	Q969P6	601 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	FBXW5	Q969U6	566 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	BICD1	Q96G01	975 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	AK8	Q96MA6	479 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	CLUHP3	Q96NS8	147 aa		5.1	□□□□□ -1.59
ATXN3-238	ENST00000556288	FAM193B	Q96PV7	902 aa	Predicted RBP	5.1	□□□□□ -1.59

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