RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 CELF2O95319 508 aaKnown RBP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 SERPINF2P08697 491 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 CYP2A6P11509 494 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 ENO3P13929 434 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 ITGB6P18564 788 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 PSEN1P49768 467 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 PSMD7P51665 324 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 MSLNQ13421 630 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 FBXO47Q5MNV8 452 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 C11orf88Q6PI97 169 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 CYP4Z2PQ8N1L4 340 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 CHP1Q99653 195 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 PRMT1Q99873 361 aaKnown RBP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 SPASTQ9UBP0 616 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 PTPRMP28827 1452 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 A0A0G2JLW4 131 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 CAND2O75155 1236 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 ENO1P06733 434 aaKnown RBP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 RHOCP08134 193 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 VEGFAP15692 232 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 PTPN11Q06124 597 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 GNA13Q14344 377 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 CLEC16AQ2KHT3 1053 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 PAPD7Q5XG87 772 aaKnown RBP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 SCARA3Q6AZY7 606 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 IQSEC1Q6DN90 963 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 ZNF720Q7Z2F6 126 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 UNC93AQ86WB7 457 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 DDX42Q86XP3 938 aaKnown RBP eCLIP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 IDI2Q9BXS1 227 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 OSBPL1AQ9BXW6 950 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 MMADHCQ9H3L0 296 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 ARHGAP23Q9P227 1491 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 SNAP23O00161 211 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 IFRD1O00458 451 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-216ENST00000556083 VHLP40337 213 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 FMR1Q06787 632 aaKnown RBP eCLIP11.06□□□□□ -0.641e-6■■■□□ 16.5
ACTN1-216ENST00000556083 CYP24A1Q07973 514 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 CTXN3Q4LDR2 81 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 DEPDC1Q5TB30 811 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 C15orf52Q6ZUT6 534 aaKnown RBP11.06□□□□□ -0.64
ACTN1-216ENST00000556083 UBE2E3Q969T4 207 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 LENG9Q96B70 501 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 C9orf72Q96LT7 481 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 WDR24Q96S15 920 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 PDCD2LQ9BRP1 358 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 C17orf80Q9BSJ5 609 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 ADNPQ9H2P0 1102 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 RGS18Q9NS28 235 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 HPSEQ9Y251 543 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 B2RBV5 119 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 TRIM49D1C9J1S8 452 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 PRR23D1E9PI22 279 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-216ENST00000556083 RAD51CO43502 376 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 PRR23D2P0DMB1 279 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-216ENST00000556083 AKR1A1P14550 325 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 CYP2A7P20853 494 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 CES1P23141 567 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 LSP1P33241 339 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 AVPR1AP37288 418 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 NPTX2P47972 431 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 CTCFP49711 727 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-216ENST00000556083 CLK1P49759 484 aaKnown RBP11.06□□□□□ -0.64
ACTN1-216ENST00000556083 CDH17Q12864 832 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 ARID5BQ14865 1188 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 SEC16BQ96JE7 1060 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 DMAP1Q9NPF5 467 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-216ENST00000556083 SCUBE2Q9NQ36 999 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 AGPAT5Q9NUQ2 364 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 FAM49BQ9NUQ9 324 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 C6orf203Q9P0P8 240 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-216ENST00000556083 RNF112Q9ULX5 631 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 KPNA5O15131 536 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 GLP2RO95838 553 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 MBL2P11226 248 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-216ENST00000556083 ZNF7P17097 686 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-216ENST00000556083 PON1P27169 355 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 DSG3P32926 999 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 THPOP40225 353 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 KDSRQ06136 332 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 GRB10Q13322 594 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 CYTH1Q15438 398 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 IRAK1BP1Q5VVH5 260 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 LMBRD2Q68DH5 695 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-216ENST00000556083 SLC27A1Q6PCB7 646 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 CHAMP1Q96JM3 812 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 PXMP2Q9NR77 195 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 PLA2G4CQ9UP65 541 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 NEURL4Q96JN8 1562 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 TFRCP02786 760 aaKnown RBP11.06□□□□□ -0.64
ACTN1-216ENST00000556083 DPEP1P16444 411 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 KLRC1P26715 233 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 SERPINB3P29508 390 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 CCT8P50990 548 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 HK2P52789 917 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 PPATQ06203 517 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 LRRC74AQ0VAA2 488 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 EPS8Q12929 822 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 CDK20Q8IZL9 346 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms