RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 LRRC3Q9BY71 257 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 TASP1Q9H6P5 420 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 IL21Q9HBE4 155 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 ZNF334Q9HCZ1 680 aaPredicted RBP8.02□□□□□ -1.13
TDP1-214ENST00000556063 ABCC13Q9NSE7 274 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 OLA1Q9NTK5 396 aaKnown RBP8.02□□□□□ -1.13
TDP1-214ENST00000556063 TMEM51Q9NW97 253 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 CLIC5Q9NZA1 410 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 ADAM22Q9P0K1 906 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 GMIPQ9P107 970 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 ARHGAP20Q9P2F6 1191 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 CHORDC1Q9UHD1 332 aaPredicted RBP8.02□□□□□ -1.13
TDP1-214ENST00000556063 ADAMTS1Q9UHI8 967 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 NAGPAQ9UK23 515 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 CDH7Q9ULB5 785 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 USTQ9Y2C2 406 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 NR2E1Q9Y466 385 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 DOCK8Q8NF50 2099 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 CHD9Q3L8U1 2897 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 NOTCH4Q99466 2003 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 DENND4CQ5VZ89 1909 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 MYO16Q9Y6X6 1858 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 ZNF840PA6NDX5 716 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 E5RJQ4 531 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 DDX3XO00571 662 aaKnown RBP eCLIP8.01□□□□□ -1.13
TDP1-214ENST00000556063 CAPN9O14815 690 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 HSF2BPO75031 334 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 LTFP02788 710 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 FTLP02792 175 aaPredicted RBP8.01□□□□□ -1.13
TDP1-214ENST00000556063 PTMAP06454 111 aaKnown RBP8.01□□□□□ -1.13
TDP1-214ENST00000556063 ZDHHC11BP0C7U3 371 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 MYBL1P10243 752 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 HDCP19113 662 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 ATP5C1P36542 298 aaKnown RBP8.01□□□□□ -1.13
TDP1-214ENST00000556063 AVPR1AP37288 418 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 GABRB2P47870 512 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 CLCN6P51797 869 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 DAOAP59103 153 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 YWHAGP61981 247 aaKnown RBP eCLIP8.01□□□□□ -1.13
TDP1-214ENST00000556063 YWHAZP63104 245 aaKnown RBP8.01□□□□□ -1.13
TDP1-214ENST00000556063 SLC6A3Q01959 620 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 GOLGA8FQ08AF8 430 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 GOLGA8DPQ0D2H9 430 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 SPA17Q15506 151 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 TEAD2Q15562 447 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 SMAD2Q15796 467 aaKnown RBP8.01□□□□□ -1.13
TDP1-214ENST00000556063 SLC18A3Q16572 532 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 PTPN20Q4JDL3 420 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 CCDC122Q5T0U0 273 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 C10orf76Q5T2E6 689 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 SNX30Q5VWJ9 437 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 BSPRYQ5W0U4 402 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 ALKBH5Q6P6C2 394 aaKnown RBP8.01□□□□□ -1.13
TDP1-214ENST00000556063 WDR59Q6PJI9 974 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 MMS22LQ6ZRQ5 1243 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 GAREM2Q75VX8 874 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 GPRIN1Q7Z2K8 1008 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 ZNF276Q8N554 614 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 TDRD5Q8NAT2 981 aaKnown RBP8.01□□□□□ -1.13
TDP1-214ENST00000556063 CCDC112Q8NEF3 446 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 SLC30A5Q8TAD4 765 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.01□□□□□ -1.13
TDP1-214ENST00000556063 SHKBP1Q8TBC3 707 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 ING5Q8WYH8 240 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 FGF13Q92913 245 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 E2F7Q96AV8 911 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 PCDHB18PQ96TA0 734 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 BAG1Q99933 345 aaPredicted RBP8.01□□□□□ -1.13
TDP1-214ENST00000556063 C11orf70Q9BRQ4 267 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 POMKQ9H5K3 350 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 NHEJ1Q9H9Q4 299 aaPredicted RBP8.01□□□□□ -1.13
TDP1-214ENST00000556063 TRPC7Q9HCX4 862 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 ASNSD1Q9NWL6 643 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 PRKAG3Q9UGI9 489 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 CYTH4Q9UIA0 394 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 CHD7Q9P2D1 2997 aa8.01□□□□□ -1.13
TDP1-214ENST00000556063 ANAPC1Q9H1A4 1944 aa8□□□□□ -1.13
TDP1-214ENST00000556063 MYO10Q9HD67 2058 aa8□□□□□ -1.13
TDP1-214ENST00000556063 A0A087X0T9 212 aa8□□□□□ -1.13
TDP1-214ENST00000556063 A0A1W2PQH9 124 aa8□□□□□ -1.13
TDP1-214ENST00000556063 YJEFN3A6XGL0 299 aa8□□□□□ -1.13
TDP1-214ENST00000556063 TMCO5BA8MYB1 307 aa8□□□□□ -1.13
TDP1-214ENST00000556063 E7ENQ6 273 aa8□□□□□ -1.13
TDP1-214ENST00000556063 GOLGA8SH3BPF8 625 aa8□□□□□ -1.13
TDP1-214ENST00000556063 PIK3R2O00459 728 aa8□□□□□ -1.13
TDP1-214ENST00000556063 DPYSL4O14531 572 aa8□□□□□ -1.13
TDP1-214ENST00000556063 PAPSS1O43252 624 aaPredicted RBP8□□□□□ -1.13
TDP1-214ENST00000556063 TLR5O60602 858 aa8□□□□□ -1.13
TDP1-214ENST00000556063 ERBB2P04626 1255 aa8□□□□□ -1.13
TDP1-214ENST00000556063 CKMP06732 381 aa8□□□□□ -1.13
TDP1-214ENST00000556063 PLEKP08567 350 aaPredicted RBP8□□□□□ -1.13
TDP1-214ENST00000556063 H2AFZP0C0S5 128 aa8□□□□□ -1.13
TDP1-214ENST00000556063 FAM228BP0C875 321 aa8□□□□□ -1.13
TDP1-214ENST00000556063 LAMP2P13473 410 aa8□□□□□ -1.13
TDP1-214ENST00000556063 RARGP13631 454 aa8□□□□□ -1.13
TDP1-214ENST00000556063 GJA1P17302 382 aa8□□□□□ -1.13
TDP1-214ENST00000556063 CEBPBP17676 345 aa8□□□□□ -1.13
TDP1-214ENST00000556063 WEE1P30291 646 aa8□□□□□ -1.13
TDP1-214ENST00000556063 CCR2P41597 374 aa8□□□□□ -1.13
TDP1-214ENST00000556063 KPNA1P52294 538 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms