RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 HSF5Q4G112 596 aaPredicted RBP15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 STXBP4Q6ZWJ1 553 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ARMCX6Q7L4S7 300 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 PIP4P1Q86T03 277 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TMEM25Q86YD3 366 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 NAT16Q8N8M0 369 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 PARD3BQ8TEW8 1205 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 OVCA2Q8WZ82 227 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 PIGKQ92643 395 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 GATA6Q92908 595 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 FBXO32Q969P5 355 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 SMOQ99835 787 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 BLZF1Q9H2G9 400 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 DMAC2Q9NW81 257 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 GMIPQ9P107 970 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 HMGXB4Q9UGU5 601 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 R3HCC1Q9Y3T6 440 aaKnown RBP15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ITPR1Q14643 2758 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 A0A1W2PQF6 199 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 KLRC4O43908 158 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TULP3O75386 442 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 RTN3O95197 1032 aaPredicted RBP15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ADH1CP00326 375 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 GABRG2P18507 467 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TUBP50607 506 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 SNRPFP62306 86 aaKnown RBP15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 CUL4BQ13620 913 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TRIM61Q5EBN2 209 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 C1orf220Q5T0J3 134 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 DAB2IPQ5VWQ8 1189 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 SLC23A3Q6PIS1 610 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 KDF1Q8NAX2 398 aaPredicted RBP15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 DEFB124Q8NES8 71 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 WHAMMQ8TF30 809 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 HMGB4Q8WW32 186 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 OTUB2Q96DC9 234 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 SLC39A2Q9NP94 309 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 FSCN3Q9NQT6 498 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 OSER1Q9NX31 292 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TBC1D14Q9P2M4 693 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 PILRBQ9UKJ0 227 aa15.23■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ATXN2Q99700 1313 aaKnown RBP15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 POLR2DO15514 142 aaKnown RBP15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 CUTAO60888 179 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 YEATS4O95619 227 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TBX18O95935 607 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ITPKAP23677 461 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 DLG4P78352 724 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 FOXC1Q12948 553 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 KNOP1Q1ED39 458 aaKnown RBP15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 SPDYCQ5MJ68 293 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 EOGTQ5NDL2 527 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 HECTD3Q5T447 861 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 UNQ6494/PRO21346Q6UXR6 183 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 GPRIN1Q7Z2K8 1008 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ACOT1Q86TX2 421 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TTC30AQ86WT1 665 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 DDX42Q86XP3 938 aaKnown RBP eCLIP15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 SYT12Q8IV01 421 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 GRAMD1CQ8IYS0 662 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TERB1Q8NA31 727 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 IQUBQ8NA54 791 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 PDZD8Q8NEN9 1154 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TMEM174Q8WUU8 243 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 SYAP1Q96A49 352 aaPredicted RBP15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ACOX2Q99424 681 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 LRRC27Q9C0I9 530 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 CSNK1G1Q9HCP0 422 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 DMAP1Q9NPF5 467 aaPredicted RBP15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 CD93Q9NPY3 652 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 SPHK2Q9NRA0 654 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ZMIZ1Q9ULJ6 1067 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 STARD13Q9Y3M8 1113 aa15.22■□□□□ 0.03
CHMP4BP1-201ENST00000556017 BAHCC1Q9P281 2608 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TCRBV21S2A2A0A5A6 115 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 HHLA1C9JL84 531 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 CCDC130P13994 396 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ENGP17813 658 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 AMPD3Q01432 767 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 GAD2Q05329 585 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 SEMA3BQ13214 749 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ORC1Q13415 861 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 EGFLAMQ63HQ2 1017 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 HTR3DQ70Z44 454 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 LPCAT2Q7L5N7 544 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 CRYBG2Q8N1P7 616 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ZNF513Q8N8E2 541 aaPredicted RBP15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 KIAA0895Q8NCT3 520 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 SCNM1Q9BWG6 230 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 KLF16Q9BXK1 252 aaPredicted RBP15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 KCTD10Q9H3F6 313 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 CAPN10Q9HC96 672 aa15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 POLMQ9NP87 494 aaPredicted RBP15.21■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ATRXP46100 2492 aa15.21■□□□□ 0.02
CHMP4BP1-201ENST00000556017 ANKRD11Q6UB99 2663 aaPredicted RBP15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 PRRT4C9JH25 899 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 AP1G2O75843 785 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 ALDH1A2O94788 518 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 STK4Q13043 487 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms