RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 UBE2TQ9NPD8 197 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-215ENST00000555616 NLRC4Q9NPP4 1024 aa10.18□□□□□ -0.78
ACTN1-215ENST00000555616 KRT82Q9NSB4 513 aa10.18□□□□□ -0.78
ACTN1-215ENST00000555616 ZNHIT6Q9NWK9 470 aaKnown RBP10.18□□□□□ -0.78
ACTN1-215ENST00000555616 THG1LQ9NWX6 298 aaKnown RBP10.18□□□□□ -0.78
ACTN1-215ENST00000555616 DNAJC12Q9UKB3 198 aa10.18□□□□□ -0.78
ACTN1-215ENST00000555616 MYO6Q9UM54 1294 aa10.18□□□□□ -0.78
ACTN1-215ENST00000555616 ARHGAP26Q9UNA1 814 aa10.18□□□□□ -0.78
ACTN1-215ENST00000555616 TICRRQ7Z2Z1 1910 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 FAM92AA1XBS5 289 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 SPECC1L-ADORA2AF8WAN1 911 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 TNFRSF10BO14763 440 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 EPHB6O15197 1021 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 NCAM2O15394 837 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 RTN3O95197 1032 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-215ENST00000555616 CCDC172P0C7W6 258 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 CCDC130P13994 396 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 KRT9P35527 623 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 SLC5A3P53794 718 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 TNK2Q07912 1038 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 ORC1Q13415 861 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 CUL2Q13617 745 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 MTF1Q14872 753 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 RRAGAQ7L523 313 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 CCDC186Q7Z3E2 898 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 RALGPS2Q86X27 583 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-215ENST00000555616 ARHGEF19Q8IW93 802 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 MAML2Q8IZL2 1156 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-215ENST00000555616 NUP93Q8N1F7 819 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 TTC39CQ8N584 583 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 PDZD8Q8NEN9 1154 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 ZMIZ2Q8NF64 920 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 OR8K1Q8NGG5 319 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 SLC2A14Q8TDB8 520 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 WHAMMQ8TF30 809 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 OVCA2Q8WZ82 227 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 FAM3CQ92520 227 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 SYN2Q92777 582 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-215ENST00000555616 SLITRK1Q96PX8 696 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 NT5C1AQ9BXI3 368 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 STK33Q9BYT3 514 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 CHRDQ9H2X0 955 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 HPS4Q9NQG7 708 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.17□□□□□ -0.782e-13■■■■■ 158.6
ACTN1-215ENST00000555616 FAM49BQ9NUQ9 324 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 GTSE1Q9NYZ3 720 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 IL37Q9NZH6 218 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 TRPM5Q9NZQ8 1165 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 FHOD1Q9Y613 1164 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 PATJQ8NI35 1801 aa10.17□□□□□ -0.78
ACTN1-215ENST00000555616 DENND4CQ5VZ89 1909 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 F8VZ95 297 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 AP1G2O75843 785 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 OAS1P00973 400 aaKnown RBP10.16□□□□□ -0.78
ACTN1-215ENST00000555616 FAM200BP0CF97 657 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 CD58P19256 250 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 STAT1P42224 750 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 SOX9P48436 509 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 TUBP50607 506 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 KPNA1P52294 538 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-215ENST00000555616 ADKP55263 362 aaKnown RBP10.16□□□□□ -0.78
ACTN1-215ENST00000555616 SLC7A9P82251 487 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 APBA1Q02410 837 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 TAF10Q12962 218 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 DRAP1Q14919 205 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-215ENST00000555616 PDGFRLQ15198 375 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 ARHGAP44Q17R89 818 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 ITPRIPL2Q3MIP1 535 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 SFMBT2Q5VUG0 894 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 DPY19L2P1Q6NXN4 242 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 GJB7Q6PEY0 223 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 TXNDC11Q6PKC3 985 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 MAMSTRQ6ZN01 415 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 KIAA1958Q8N8K9 716 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 ARL14EPQ8N8R7 260 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-215ENST00000555616 C12orf29Q8N999 325 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 CCDC112Q8NEF3 446 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 SH3RF2Q8TEC5 729 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 BAP1Q92560 729 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 FBXO32Q969P5 355 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 PANX2Q96RD6 677 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 CYP2S1Q96SQ9 504 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 KCNK16Q96T55 309 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 DNAJC7Q99615 494 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 HNRNPABQ99729 332 aaKnown RBP10.16□□□□□ -0.78
ACTN1-215ENST00000555616 SMOQ99835 787 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 ARID3AQ99856 593 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 MED10Q9BTT4 135 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 NAA15Q9BXJ9 866 aaKnown RBP10.16□□□□□ -0.78
ACTN1-215ENST00000555616 DNAI2Q9GZS0 605 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 PNPLA8Q9NP80 782 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 PRMT8Q9NR22 394 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-215ENST00000555616 ABHD10Q9NUJ1 306 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 SPATA6Q9NWH7 488 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-215ENST00000555616 COMMD8Q9NX08 183 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 FBXO4Q9UKT5 387 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 NDRG2Q9UN36 371 aaKnown RBP10.16□□□□□ -0.78
ACTN1-215ENST00000555616 F5P12259 2224 aa10.16□□□□□ -0.78
ACTN1-215ENST00000555616 GREB1Q4ZG55 1949 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 MIA3Q5JRA6 1907 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms