RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 FBRSL1Q9HCM7 1045 aaKnown RBP21.61■■□□□ 1.05
VTI1B-205ENST00000555543 CYLDQ9NQC7 956 aa21.61■■□□□ 1.05
VTI1B-205ENST00000555543 PRMT8Q9NR22 394 aaPredicted RBP21.61■■□□□ 1.05
VTI1B-205ENST00000555543 PAEPP09466 180 aa21.6■■□□□ 1.05
VTI1B-205ENST00000555543 VDRP11473 427 aa21.6■■□□□ 1.05
VTI1B-205ENST00000555543 ERCC5P28715 1186 aaPredicted RBP21.6■■□□□ 1.05
VTI1B-205ENST00000555543 BCAT1P54687 386 aa21.6■■□□□ 1.05
VTI1B-205ENST00000555543 APBA1Q02410 837 aa21.6■■□□□ 1.05
VTI1B-205ENST00000555543 PDE4CQ08493 712 aa21.6■■□□□ 1.05
VTI1B-205ENST00000555543 LRRC32Q14392 662 aa21.6■■□□□ 1.05
VTI1B-205ENST00000555543 TPD52L1Q16890 204 aaPredicted RBP21.6■■□□□ 1.05
VTI1B-205ENST00000555543 TMEM196Q5HYL7 178 aa21.6■■□□□ 1.05
VTI1B-205ENST00000555543 RAB41Q5JT25 222 aa21.6■■□□□ 1.05
VTI1B-205ENST00000555543 FSTL4Q6MZW2 842 aa21.6■■□□□ 1.05
VTI1B-205ENST00000555543 RBM43Q6ZSC3 357 aaKnown RBP21.6■■□□□ 1.05
VTI1B-205ENST00000555543 DDX42Q86XP3 938 aaKnown RBP eCLIP21.6■■□□□ 1.05
VTI1B-205ENST00000555543 RBBP8NLQ8NC74 664 aaPredicted RBP21.6■■□□□ 1.05
VTI1B-205ENST00000555543 THAP9Q9H5L6 903 aa21.6■■□□□ 1.05
VTI1B-205ENST00000555543 NUDT5Q9UKK9 219 aa21.6■■□□□ 1.05
VTI1B-205ENST00000555543 PROB1E7EW31 1015 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 TRDMT1O14717 391 aaKnown RBP21.59■■□□□ 1.05
VTI1B-205ENST00000555543 MDM4O15151 490 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 NFATC1O95644 943 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 CYP17A1P05093 508 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 BRD2P25440 801 aaKnown RBP21.59■■□□□ 1.05
VTI1B-205ENST00000555543 MTIF2P46199 727 aaKnown RBP21.59■■□□□ 1.05
VTI1B-205ENST00000555543 ZNF132P52740 706 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 BST2Q10589 180 aaKnown RBP21.59■■□□□ 1.05
VTI1B-205ENST00000555543 GAB4Q2WGN9 574 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 HSP90AA4PQ58FG1 418 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 DGKKQ5KSL6 1271 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 TRIM65Q6PJ69 517 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 TSSK4Q6SA08 328 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 KIAA1958Q8N8K9 716 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 UBA3Q8TBC4 463 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 UBXN6Q9BZV1 441 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 NACA2Q9H009 215 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.59■■□□□ 1.05
VTI1B-205ENST00000555543 DACH1Q9UI36 760 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 NAGPAQ9UK23 515 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 FBXO4Q9UKT5 387 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 R4GN57 208 aa21.59■■□□□ 1.05
VTI1B-205ENST00000555543 XPO1O14980 1071 aaKnown RBP21.58■■□□□ 1.05
VTI1B-205ENST00000555543 IRF1P10914 325 aa21.58■■□□□ 1.05
VTI1B-205ENST00000555543 RARGP13631 454 aa21.58■■□□□ 1.05
VTI1B-205ENST00000555543 SLC9A1P19634 815 aa21.58■■□□□ 1.05
VTI1B-205ENST00000555543 CSTF1Q05048 431 aaKnown RBP21.58■■□□□ 1.05
VTI1B-205ENST00000555543 PKDCCQ504Y2 493 aa21.58■■□□□ 1.05
VTI1B-205ENST00000555543 GJB7Q6PEY0 223 aa21.58■■□□□ 1.05
VTI1B-205ENST00000555543 IER2Q9BTL4 223 aa21.58■■□□□ 1.05
VTI1B-205ENST00000555543 C2orf42Q9NWW7 574 aa21.58■■□□□ 1.05
VTI1B-205ENST00000555543 HESX1Q9UBX0 185 aa21.58■■□□□ 1.05
VTI1B-205ENST00000555543 KIAA1257Q9ULG3 409 aa21.58■■□□□ 1.05
VTI1B-205ENST00000555543 E2F8A0AVK6 867 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 GOLGA6L22H0YM25 854 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 GREM1O60565 184 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 EGFP01133 1207 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 TDGF1P13385 188 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 GALK1P51570 392 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 TKTL1P51854 596 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 SLC8A3P57103 927 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 SATB1Q01826 763 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 PKN3Q6P5Z2 889 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 LCLAT1Q6UWP7 414 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 BHLHA9Q7RTU4 235 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 ADGRG2Q8IZP9 1017 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 EZH1Q92800 747 aaPredicted RBP21.57■■□□□ 1.04
VTI1B-205ENST00000555543 P2RY13Q9BPV8 354 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 KLF16Q9BXK1 252 aaPredicted RBP21.57■■□□□ 1.04
VTI1B-205ENST00000555543 ULBP1Q9BZM6 244 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 UBE2TQ9NPD8 197 aaPredicted RBP21.57■■□□□ 1.04
VTI1B-205ENST00000555543 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.57■■□□□ 1.04
VTI1B-205ENST00000555543 CNTN6Q9UQ52 1028 aa21.57■■□□□ 1.04
VTI1B-205ENST00000555543 FANCMQ8IYD8 2048 aa21.56■■□□□ 1.04
VTI1B-205ENST00000555543 SLC9A3R1O14745 358 aaPredicted RBP21.56■■□□□ 1.04
VTI1B-205ENST00000555543 ATP5C1P36542 298 aaKnown RBP21.56■■□□□ 1.04
VTI1B-205ENST00000555543 OPRD1P41143 372 aa21.56■■□□□ 1.04
VTI1B-205ENST00000555543 PLA2G4AP47712 749 aa21.56■■□□□ 1.04
VTI1B-205ENST00000555543 AMPD2Q01433 879 aa21.56■■□□□ 1.04
VTI1B-205ENST00000555543 GRSF1Q12849 480 aaKnown RBP eCLIP21.56■■□□□ 1.04
VTI1B-205ENST00000555543 DHCR24Q15392 516 aa21.56■■□□□ 1.04
VTI1B-205ENST00000555543 MAN2A1Q16706 1144 aa21.56■■□□□ 1.04
VTI1B-205ENST00000555543 ZNF528Q3MIS6 628 aa21.56■■□□□ 1.04
VTI1B-205ENST00000555543 C10orf120Q5SQS8 335 aa21.56■■□□□ 1.04
VTI1B-205ENST00000555543 MAMSTRQ6ZN01 415 aa21.56■■□□□ 1.04
VTI1B-205ENST00000555543 GBP6Q6ZN66 633 aa21.56■■□□□ 1.04
VTI1B-205ENST00000555543 ASCL5Q7RTU5 278 aa21.56■■□□□ 1.04
VTI1B-205ENST00000555543 BBS7Q8IWZ6 715 aa21.56■■□□□ 1.04
VTI1B-205ENST00000555543 SPEM1Q8N4L4 309 aa21.56■■□□□ 1.04
VTI1B-205ENST00000555543 NDRG1Q92597 394 aaKnown RBP21.56■■□□□ 1.04
VTI1B-205ENST00000555543 SAMSN1Q9NSI8 373 aaKnown RBP21.56■■□□□ 1.04
VTI1B-205ENST00000555543 SH3BP1Q9Y3L3 701 aa21.56■■□□□ 1.04
VTI1B-205ENST00000555543 FRYLO94915 3013 aa21.56■■□□□ 1.04
VTI1B-205ENST00000555543 GTPBP10A4D1E9 387 aaKnown RBP21.55■■□□□ 1.04
VTI1B-205ENST00000555543 M0QYV0 167 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 GABBR2O75899 941 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 ZBED1O96006 694 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 SETSIPP0DME0 302 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 PSEN1P49768 467 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 ADIGQ0VDE8 80 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms