RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ZDHHC17Q8IUH5 632 aa25.32■■□□□ 1.64
TMEM260-207ENST00000555497 NDC80O14777 642 aa25.32■■□□□ 1.64
TMEM260-207ENST00000555497 TNPO2O14787 897 aaKnown RBP25.32■■□□□ 1.64
TMEM260-207ENST00000555497 XPOTO43592 962 aaKnown RBP25.32■■□□□ 1.64
TMEM260-207ENST00000555497 SLC26A9Q7LBE3 791 aa25.32■■□□□ 1.64
TMEM260-207ENST00000555497 ADGRF2Q8IZF7 708 aa25.32■■□□□ 1.64
TMEM260-207ENST00000555497 LRRN4Q8WUT4 740 aa25.32■■□□□ 1.64
TMEM260-207ENST00000555497 ZMYND8Q9ULU4 1186 aaPredicted RBP25.32■■□□□ 1.64
TMEM260-207ENST00000555497 DCAF8L1A6NGE4 600 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 VGLL3A8MV65 326 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 H7C0C1 242 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 MAP3K6O95382 1288 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 ATP5OP48047 213 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 LIG3P49916 1009 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 SF3A3Q12874 501 aaKnown RBP eCLIP25.31■■□□□ 1.64
TMEM260-207ENST00000555497 SV2CQ496J9 727 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 GKAP1Q5VSY0 366 aaPredicted RBP25.31■■□□□ 1.64
TMEM260-207ENST00000555497 YTHDF3Q7Z739 585 aaKnown RBP25.31■■□□□ 1.64
TMEM260-207ENST00000555497 MAP7D3Q8IWC1 876 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 CACNA2D3Q8IZS8 1091 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.31■■□□□ 1.64
TMEM260-207ENST00000555497 NDRG1Q92597 394 aaKnown RBP25.31■■□□□ 1.64
TMEM260-207ENST00000555497 XPO7Q9UIA9 1087 aaKnown RBP25.31■■□□□ 1.64
TMEM260-207ENST00000555497 C6orf222P0C671 652 aaPredicted RBP25.31■■□□□ 1.64
TMEM260-207ENST00000555497 GNAT1P11488 350 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 SSTR1P30872 391 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 PTPN9P43378 593 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 ARL4CP56559 192 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 BASP1P80723 227 aaKnown RBP25.31■■□□□ 1.64
TMEM260-207ENST00000555497 TADA2BQ86TJ2 420 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 CENPIQ92674 756 aaPredicted RBP25.31■■□□□ 1.64
TMEM260-207ENST00000555497 WNT8BQ93098 351 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 TBCBQ99426 244 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 HEY1Q9Y5J3 304 aa25.31■■□□□ 1.64
TMEM260-207ENST00000555497 E7ESA3 106 aa25.3■■□□□ 1.64
TMEM260-207ENST00000555497 MDM4O15151 490 aa25.3■■□□□ 1.64
TMEM260-207ENST00000555497 KIAA0754O94854 1291 aa25.3■■□□□ 1.64
TMEM260-207ENST00000555497 STIP1P31948 543 aaKnown RBP25.3■■□□□ 1.64
TMEM260-207ENST00000555497 SNX16P57768 344 aa25.3■■□□□ 1.64
TMEM260-207ENST00000555497 SYCP2LQ5T4T6 812 aa25.3■■□□□ 1.64
TMEM260-207ENST00000555497 SLC9A4Q6AI14 798 aa25.3■■□□□ 1.64
TMEM260-207ENST00000555497 PIGWQ7Z7B1 504 aa25.3■■□□□ 1.64
TMEM260-207ENST00000555497 TDRPQ86YL5 185 aa25.3■■□□□ 1.64
TMEM260-207ENST00000555497 RIBC1Q8N443 379 aaPredicted RBP25.3■■□□□ 1.64
TMEM260-207ENST00000555497 OTUD6BQ8N6M0 293 aa25.3■■□□□ 1.64
TMEM260-207ENST00000555497 SOCS4Q8WXH5 440 aa25.3■■□□□ 1.64
TMEM260-207ENST00000555497 PPP1R10Q96QC0 940 aaKnown RBP25.3■■□□□ 1.64
TMEM260-207ENST00000555497 TSPAN18Q96SJ8 248 aa25.3■■□□□ 1.64
TMEM260-207ENST00000555497 RASA4BC9J798 803 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 APOL1O14791 398 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 RASA4O43374 803 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 HUS1O60921 280 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 VIMP08670 466 aaKnown RBP25.29■■□□□ 1.64
TMEM260-207ENST00000555497 AFF1P51825 1210 aaKnown RBP25.29■■□□□ 1.64
TMEM260-207ENST00000555497 PPP6R3Q5H9R7 873 aaPredicted RBP25.29■■□□□ 1.64
TMEM260-207ENST00000555497 RNF187Q5TA31 235 aaPredicted RBP25.29■■□□□ 1.64
TMEM260-207ENST00000555497 SAPCD2Q86UD0 394 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 TRABD2AQ86V40 505 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 MRRFQ96E11 262 aaKnown RBP25.29■■□□□ 1.64
TMEM260-207ENST00000555497 CABS1Q96KC9 395 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 CDY2AQ9Y6F7 541 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 CLDN5O00501 218 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 PIAS1O75925 651 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 AKR1A1P14550 325 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 ACAT1P24752 427 aaKnown RBP25.29■■□□□ 1.64
TMEM260-207ENST00000555497 L1CAMP32004 1257 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 CRHR2Q13324 411 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 EFTUD2Q15029 972 aaKnown RBP eCLIP25.29■■□□□ 1.64
TMEM260-207ENST00000555497 PKN2Q16513 984 aaKnown RBP25.29■■□□□ 1.64
TMEM260-207ENST00000555497 RGMBQ6NW40 437 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 B3GALNT2Q8NCR0 500 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 PYROXD1Q8WU10 500 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 FAF2Q96CS3 445 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 RABGEF1Q9UJ41 708 aa25.29■■□□□ 1.64
TMEM260-207ENST00000555497 WARSP23381 471 aaKnown RBP25.28■■□□□ 1.64
TMEM260-207ENST00000555497 LRPAP1P30533 357 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 BCAR1P56945 870 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 CXCL17Q6UXB2 119 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 FUKQ8N0W3 1084 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 FBXO36Q8NEA4 188 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 GDAP1Q8TB36 358 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 PHACTR1Q9C0D0 580 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 MTMR10Q9NXD2 777 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 ACTL7BQ9Y614 415 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 DUSP11O75319 330 aaKnown RBP25.28■■□□□ 1.64
TMEM260-207ENST00000555497 BEST1O76090 585 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 TGM2P21980 687 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 RBL1P28749 1068 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 MRPS6P82932 125 aaKnown RBP25.28■■□□□ 1.64
TMEM260-207ENST00000555497 BBS9Q3SYG4 887 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 GNASQ5JWF2 1037 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 WSCD1Q658N2 575 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 PAQR9Q6ZVX9 377 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 IGDCC3Q8IVU1 814 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 GSTCDQ8NEC7 633 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 DYDC1Q8WWB3 177 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 KIF9Q9HAQ2 790 aa25.28■■□□□ 1.64
TMEM260-207ENST00000555497 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.27■■□□□ 1.64
TMEM260-207ENST00000555497 CYB561D2O14569 222 aa25.27■■□□□ 1.64
TMEM260-207ENST00000555497 KCNN4O15554 427 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms