RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 MRPS23Q9Y3D9 190 aaKnown RBP10.4□□□□□ -0.74
PSEN1-213ENST00000555386 TRIOO75962 3097 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 CLUHO75153 1309 aa10.4□□□□□ -0.75
PSEN1-213ENST00000555386 DENND4CQ5VZ89 1909 aa10.4□□□□□ -0.75
PSEN1-213ENST00000555386 DENND4AQ7Z401 1863 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 A0A1W2PRU2 124 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 MACROD2A1Z1Q3 448 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 BTNL10A8MVZ5 291 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 PIK3R2O00459 728 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 NRG2O14511 850 aaPredicted RBP10.39□□□□□ -0.75
PSEN1-213ENST00000555386 ENC1O14682 589 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 TRIM66O15016 1216 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 SASH3O75995 380 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 GFPT2O94808 682 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 VDRP11473 427 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 CEBPBP17676 345 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 GABRR2P28476 465 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 GNA15P30679 374 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 HOXA9P31269 272 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 CCR2P41597 374 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 MAGEA11P43364 429 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 USP46P62068 366 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 CAMK2BQ13554 666 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 SMAD2Q15796 467 aaKnown RBP10.39□□□□□ -0.75
PSEN1-213ENST00000555386 SLC18A3Q16572 532 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 PUS10Q3MIT2 529 aaKnown RBP10.39□□□□□ -0.75
PSEN1-213ENST00000555386 TAF3Q5VWG9 929 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 CCDC70Q6NSX1 233 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 DPY19L2P1Q6NXN4 242 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 VSTM1Q6UX27 236 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 ITIH5Q86UX2 942 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 SCAMP5Q8TAC9 235 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 SUSD6Q92537 303 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 PSMG2Q969U7 264 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 MCRS1Q96EZ8 462 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 NECTIN4Q96NY8 510 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 NOX5Q96PH1 765 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 SPAG5Q96R06 1193 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 PNKPQ96T60 521 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 HNRNPABQ99729 332 aaKnown RBP10.39□□□□□ -0.75
PSEN1-213ENST00000555386 ATXN3LQ9H3M9 355 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 ACBD3Q9H3P7 528 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 WDR6Q9NNW5 1121 aaKnown RBP10.39□□□□□ -0.75
PSEN1-213ENST00000555386 DMAP1Q9NPF5 467 aaPredicted RBP10.39□□□□□ -0.75
PSEN1-213ENST00000555386 RNF14Q9UBS8 474 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 HESX1Q9UBX0 185 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 TSPAN16Q9UKR8 245 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 OBSL1O75147 1896 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 ANAPC1Q9H1A4 1944 aa10.39□□□□□ -0.75
PSEN1-213ENST00000555386 M0QYV0 167 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 TULP2O00295 520 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 MICAL2O94851 1124 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 PAEPP09466 180 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 BMP1P13497 986 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 NPR3P17342 541 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 RGS7P49802 495 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 CYP4F8P98187 520 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 TEAD2Q15562 447 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 ASIC2Q16515 512 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 TDRD12Q587J7 1177 aaKnown RBP10.38□□□□□ -0.75
PSEN1-213ENST00000555386 CLEC20AQ6ZU45 233 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 DENND5BQ6ZUT9 1274 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 GPRIN1Q7Z2K8 1008 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 SLC47A2Q86VL8 602 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 TTC30AQ86WT1 665 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 PASD1Q8IV76 773 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 FMNL3Q8IVF7 1028 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 MMGT1Q8N4V1 131 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 NOA1Q8NC60 698 aaKnown RBP10.38□□□□□ -0.75
PSEN1-213ENST00000555386 ZMIZ2Q8NF64 920 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 SHC3Q92529 594 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 FAM81BQ96LP2 452 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 MYADMQ96S97 322 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 ZSWIM1Q9BR11 485 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 PHF7Q9BWX1 381 aaPredicted RBP10.38□□□□□ -0.75
PSEN1-213ENST00000555386 DUSP16Q9BY84 665 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 VIPAS39Q9H9C1 493 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 TRPC7Q9HCX4 862 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 HSFX1Q9UBD0 423 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 HYOU1Q9Y4L1 999 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 ASB3Q9Y575 518 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 PATJQ8NI35 1801 aa10.38□□□□□ -0.75
PSEN1-213ENST00000555386 MUC3AQ02505 3323 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 C2CD4DB7Z1M9 353 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 F8VZ95 297 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 O00370 1275 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 SLC34A2O95436 690 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 CFHP08603 1231 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 RHOXF2BP0C7M4 288 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 CSH1P0DML2 217 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 CSH2P0DML3 217 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 HMGA1P17096 107 aaKnown RBP10.37□□□□□ -0.75
PSEN1-213ENST00000555386 PRKCIP41743 596 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 ZNF132P52740 706 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 SLC5A3P53794 718 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 SLC8A3P57103 927 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 VSNL1P62760 191 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 PTK2Q05397 1052 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 PDE4CQ08493 712 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 KLHL30Q0D2K2 578 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms