RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 CHORDC1Q9UHD1 332 aaPredicted RBP16.42■□□□□ 0.22
NEDD1-207ENST00000555114 NME7Q9Y5B8 376 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 ANTXRLA6NF34 631 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 CUTAO60888 179 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 TULP3O75386 442 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 CFIP05156 583 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 ENGP17813 658 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 PTGER3P43115 390 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 DUOXA1Q1HG43 343 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 MAP7D1Q3KQU3 841 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 C10orf76Q5T2E6 689 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 SLC23A3Q6PIS1 610 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 SFTPA1Q8IWL2 248 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 NAT16Q8N8M0 369 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 TERB1Q8NA31 727 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 KDF1Q8NAX2 398 aaPredicted RBP16.41■□□□□ 0.22
NEDD1-207ENST00000555114 SCFD1Q8WVM8 642 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 XPO6Q96QU8 1125 aaKnown RBP16.41■□□□□ 0.22
NEDD1-207ENST00000555114 XYLT2Q9H1B5 865 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 FBXO44Q9H4M3 255 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 SPHK2Q9NRA0 654 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 TMEM30AQ9NV96 361 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 ZMIZ1Q9ULJ6 1067 aa16.41■□□□□ 0.22
NEDD1-207ENST00000555114 ADAM23O75077 832 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 ZNF217O75362 1048 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 AP1G2O75843 785 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 YEATS4O95619 227 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 HOXB2P14652 356 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 RPL6Q02878 288 aaKnown RBP16.4■□□□□ 0.22
NEDD1-207ENST00000555114 GFPT1Q06210 699 aaPredicted RBP16.4■□□□□ 0.22
NEDD1-207ENST00000555114 MESP2Q0VG99 397 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 KNOP1Q1ED39 458 aaKnown RBP16.4■□□□□ 0.22
NEDD1-207ENST00000555114 BMT2Q1RMZ1 405 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 GRAMD4Q6IC98 578 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 BBS7Q8IWZ6 715 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 ETFBKMTQ8IXQ9 262 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 PHTF2Q8N3S3 785 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 SCAMP5Q8TAC9 235 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 ZNF516Q92618 1163 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 ZFRQ96KR1 1074 aaKnown RBP16.4■□□□□ 0.22
NEDD1-207ENST00000555114 KCNK16Q96T55 309 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 SMYD3Q9H7B4 428 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 CCSER2Q9H7U1 834 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 TLR8Q9NR97 1041 aaKnown RBP16.4■□□□□ 0.22
NEDD1-207ENST00000555114 KRT82Q9NSB4 513 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 GMIPQ9P107 970 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 TFIP11Q9UBB9 837 aaKnown RBP16.4■□□□□ 0.22
NEDD1-207ENST00000555114 MBD1Q9UIS9 605 aaPredicted RBP16.4■□□□□ 0.22
NEDD1-207ENST00000555114 LSM7Q9UK45 103 aaKnown RBP16.4■□□□□ 0.22
NEDD1-207ENST00000555114 PILRBQ9UKJ0 227 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 SLC6A14Q9UN76 642 aa16.4■□□□□ 0.22
NEDD1-207ENST00000555114 PVALEFA0A1B0GWK0 134 aa16.39■□□□□ 0.21
NEDD1-207ENST00000555114 IRF1P10914 325 aa16.39■□□□□ 0.21
NEDD1-207ENST00000555114 CHRM1P11229 460 aaPredicted RBP16.39■□□□□ 0.21
NEDD1-207ENST00000555114 NTSR1P30989 418 aa16.39■□□□□ 0.21
NEDD1-207ENST00000555114 NCOA4Q13772 614 aa16.39■□□□□ 0.21
NEDD1-207ENST00000555114 PEAR1Q5VY43 1037 aaPredicted RBP16.39■□□□□ 0.21
NEDD1-207ENST00000555114 SCARA5Q6ZMJ2 495 aa16.39■□□□□ 0.21
NEDD1-207ENST00000555114 SCNM1Q9BWG6 230 aa16.39■□□□□ 0.21
NEDD1-207ENST00000555114 ZDHHC4Q9NPG8 344 aa16.39■□□□□ 0.21
NEDD1-207ENST00000555114 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.39■□□□□ 0.21
NEDD1-207ENST00000555114 TMEM74BQ9NUR3 256 aa16.39■□□□□ 0.21
NEDD1-207ENST00000555114 FAM13BQ9NYF5 915 aa16.39■□□□□ 0.21
NEDD1-207ENST00000555114 IL37Q9NZH6 218 aa16.39■□□□□ 0.21
NEDD1-207ENST00000555114 ATXN2Q99700 1313 aaKnown RBP16.39■□□□□ 0.21
NEDD1-207ENST00000555114 FAM92AA1XBS5 289 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 UPK3BL1B0FP48 263 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 UPK3BL2E5RIL1 263 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 TLR5O60602 858 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 OPHN1O60890 802 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 ZDHHC11BP0C7U3 371 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 SPINK2P20155 84 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 ITPKAP23677 461 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 CDH8P55286 799 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 EHHADHQ08426 723 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 HNRNPDQ14103 355 aaKnown RBP16.38■□□□□ 0.21
NEDD1-207ENST00000555114 TMEM25Q86YD3 366 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 CHPFQ8IZ52 775 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 FRMD1Q8N878 549 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 GTPBP2Q9BX10 602 aaKnown RBP16.38■□□□□ 0.21
NEDD1-207ENST00000555114 SLC39A2Q9NP94 309 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 FOXD4L1Q9NU39 408 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 DNAJC17Q9NVM6 304 aaKnown RBP16.38■□□□□ 0.21
NEDD1-207ENST00000555114 CALCOCO1Q9P1Z2 691 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 WDR35Q9P2L0 1181 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 WASF3Q9UPY6 502 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 STARD13Q9Y3M8 1113 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 CEP295Q9C0D2 2601 aa16.38■□□□□ 0.21
NEDD1-207ENST00000555114 ZFHX4Q86UP3 3567 aa16.37■□□□□ 0.21
NEDD1-207ENST00000555114 H0Y626 953 aa16.37■□□□□ 0.21
NEDD1-207ENST00000555114 POLR2DO15514 142 aaKnown RBP16.37■□□□□ 0.21
NEDD1-207ENST00000555114 TRIM16O95361 564 aa16.37■□□□□ 0.21
NEDD1-207ENST00000555114 RPN1P04843 607 aaKnown RBP16.37■□□□□ 0.21
NEDD1-207ENST00000555114 SYPP08247 313 aa16.37■□□□□ 0.21
NEDD1-207ENST00000555114 SERPINF2P08697 491 aa16.37■□□□□ 0.21
NEDD1-207ENST00000555114 GABRG2P18507 467 aa16.37■□□□□ 0.21
NEDD1-207ENST00000555114 ATP5C1P36542 298 aaKnown RBP16.37■□□□□ 0.21
NEDD1-207ENST00000555114 ZNF33AQ06730 810 aa16.37■□□□□ 0.21
NEDD1-207ENST00000555114 SGSM1Q2NKQ1 1148 aa16.37■□□□□ 0.21
NEDD1-207ENST00000555114 SHC4Q6S5L8 630 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms