RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 MMEP08473 750 aa18.24■□□□□ 0.51
SHOX-204ENST00000554971 NUDT17P0C025 328 aa18.24■□□□□ 0.51
SHOX-204ENST00000554971 WEE2P0C1S8 567 aa18.24■□□□□ 0.51
SHOX-204ENST00000554971 LMO2P25791 158 aa18.24■□□□□ 0.51
SHOX-204ENST00000554971 CDR1P51861 262 aa18.24■□□□□ 0.51
SHOX-204ENST00000554971 CORO7P57737 925 aa18.24■□□□□ 0.51
SHOX-204ENST00000554971 CCDC142Q17RM4 750 aa18.24■□□□□ 0.51
SHOX-204ENST00000554971 CLEC16AQ2KHT3 1053 aa18.24■□□□□ 0.51
SHOX-204ENST00000554971 WDR44Q5JSH3 913 aa18.24■□□□□ 0.51
SHOX-204ENST00000554971 KCTD16Q68DU8 428 aa18.24■□□□□ 0.51
SHOX-204ENST00000554971 PDE12Q6L8Q7 609 aaKnown RBP18.24■□□□□ 0.51
SHOX-204ENST00000554971 FOXR1Q6PIV2 292 aa18.24■□□□□ 0.51
SHOX-204ENST00000554971 UBLCP1Q8WVY7 318 aaPredicted RBP18.24■□□□□ 0.51
SHOX-204ENST00000554971 SLCO2A1Q92959 643 aa18.24■□□□□ 0.51
SHOX-204ENST00000554971 ZNF653Q96CK0 615 aa18.24■□□□□ 0.51
SHOX-204ENST00000554971 CDY1Q9Y6F8 540 aa18.24■□□□□ 0.51
SHOX-204ENST00000554971 CA8P35219 290 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 PTGIRP43119 386 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 TCEAL5Q5H9L2 206 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 SLC8B1Q6J4K2 584 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 TRIM72Q6ZMU5 477 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 HOOK3Q86VS8 718 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 SLC13A5Q86YT5 568 aaPredicted RBP18.23■□□□□ 0.51
SHOX-204ENST00000554971 TMEM86AQ8N2M4 240 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 PRELID2Q8N945 189 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 MAGOHBQ96A72 148 aaKnown RBP18.23■□□□□ 0.51
SHOX-204ENST00000554971 KLHL5Q96PQ7 755 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 FNIP2Q9P278 1114 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 MTRF1LQ9UGC7 380 aaKnown RBP18.23■□□□□ 0.51
SHOX-204ENST00000554971 HMGXB4Q9UGU5 601 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 DSEQ9UL01 958 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 NR2E1Q9Y466 385 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 BACE2Q9Y5Z0 518 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 SPOPO43791 374 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 OR4Q2P0C623 313 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 LSP1P33241 339 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 MAN1A1P33908 653 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 CTXN3Q4LDR2 81 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 ZNF280DQ6N043 979 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 SH2D3CQ8N5H7 860 aa18.23■□□□□ 0.51
SHOX-204ENST00000554971 NSUN3Q9H649 340 aaKnown RBP18.23■□□□□ 0.51
SHOX-204ENST00000554971 WARSP23381 471 aaKnown RBP18.22■□□□□ 0.51
SHOX-204ENST00000554971 ACAT1P24752 427 aaKnown RBP18.22■□□□□ 0.51
SHOX-204ENST00000554971 OR1D2P34982 312 aa18.22■□□□□ 0.51
SHOX-204ENST00000554971 MAGEA9P43362 315 aa18.22■□□□□ 0.51
SHOX-204ENST00000554971 NRIP1P48552 1158 aa18.22■□□□□ 0.51
SHOX-204ENST00000554971 SLC20A2Q08357 652 aa18.22■□□□□ 0.51
SHOX-204ENST00000554971 HYAL1Q12794 435 aa18.22■□□□□ 0.51
SHOX-204ENST00000554971 ZNF211Q13398 564 aaPredicted RBP18.22■□□□□ 0.51
SHOX-204ENST00000554971 KCNC3Q14003 757 aa18.22■□□□□ 0.51
SHOX-204ENST00000554971 SLMAPQ14BN4 828 aa18.22■□□□□ 0.51
SHOX-204ENST00000554971 SYDE1Q6ZW31 735 aaPredicted RBP18.22■□□□□ 0.51
SHOX-204ENST00000554971 LRRTM3Q86VH5 581 aa18.22■□□□□ 0.51
SHOX-204ENST00000554971 VN1R2Q8NFZ6 395 aa18.22■□□□□ 0.51
SHOX-204ENST00000554971 KRT35Q92764 455 aa18.22■□□□□ 0.51
SHOX-204ENST00000554971 VCPIP1Q96JH7 1222 aa18.22■□□□□ 0.51
SHOX-204ENST00000554971 RASSF4Q9H2L5 321 aa18.22■□□□□ 0.51
SHOX-204ENST00000554971 DPH5Q9H2P9 285 aa18.22■□□□□ 0.51
SHOX-204ENST00000554971 PABPC3Q9H361 631 aaKnown RBP18.22■□□□□ 0.51
SHOX-204ENST00000554971 LRRC19Q9H756 370 aa18.22■□□□□ 0.51
SHOX-204ENST00000554971 CNOT10Q9H9A5 744 aaKnown RBP18.22■□□□□ 0.51
SHOX-204ENST00000554971 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.22■□□□□ 0.51
SHOX-204ENST00000554971 DDX43Q9NXZ2 648 aaKnown RBP18.22■□□□□ 0.51
SHOX-204ENST00000554971 WDR27A2RRH5 827 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 MYO1FO00160 1098 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 VNN2O95498 520 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 UNGP13051 313 aaPredicted RBP18.21■□□□□ 0.51
SHOX-204ENST00000554971 FOSL2P15408 326 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 ROR1Q01973 937 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 INCA1Q0VD86 236 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 PTP4A2Q12974 167 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 CUL2Q13617 745 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 MICALCLQ6ZW33 695 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 UBR7Q8N806 425 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 TWNKQ96RR1 684 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 TMEM109Q9BVC6 243 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 FEZ2Q9UHY8 353 aaPredicted RBP18.21■□□□□ 0.51
SHOX-204ENST00000554971 SSX2IPQ9Y2D8 614 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 ARHGEF37A1IGU5 675 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 NDUFAB1O14561 156 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 CLASP2O75122 1294 aaKnown RBP18.21■□□□□ 0.51
SHOX-204ENST00000554971 CCT5P48643 541 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 NDUFV1P49821 464 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 CLCN4P51793 760 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 PDCLQ13371 301 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 DUSP6Q16828 381 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 NAA35Q5VZE5 725 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 SPATA18Q8TC71 538 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 FAXDC2Q96IV6 333 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 PKMYT1Q99640 499 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 TRIM51Q9BSJ1 452 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 DPEP3Q9H4B8 488 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 TLE6Q9H808 572 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 HOMER3Q9NSC5 361 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 CNOT8Q9UFF9 292 aaKnown RBP18.21■□□□□ 0.51
SHOX-204ENST00000554971 LCMT1Q9UIC8 334 aa18.21■□□□□ 0.51
SHOX-204ENST00000554971 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.21■□□□□ 0.51
SHOX-204ENST00000554971 H7C4K7 107 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 TGM5O43548 720 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 ATP2C2O75185 946 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms