RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 TM4SF4P48230 202 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 COPAP53621 1224 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 CYP4F2P78329 520 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 CLCA4Q14CN2 919 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 ST3GAL2Q16842 350 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 LONRF1Q17RB8 773 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 C4orf46Q504U0 113 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 FAM209BQ5JX69 171 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 ZNF575Q86XF7 245 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 KRT73Q86Y46 540 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 TERB1Q8NA31 727 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 SEMA6DQ8NFY4 1073 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 CTHRC1Q96CG8 243 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 REPS1Q96D71 796 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 VPS50Q96JG6 964 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 SNX27Q96L92 541 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 CCDC138Q96M89 665 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 SNX18Q96RF0 628 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 MYD88Q99836 296 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 SLC25A32Q9H2D1 315 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 TMOD4Q9NZQ9 345 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 MGAT4CQ9UBM8 478 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 PHTF1Q9UMS5 762 aa4.77□□□□□ -1.65
SCFD1-214ENST00000554819 A8MVJ9 347 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 RASA4BC9J798 803 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 MASP2O00187 686 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 RASA4O43374 803 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 KCNQ3O43525 872 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 TMPRSS11DO60235 418 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 CCNT2O60583 730 aaKnown RBP4.76□□□□□ -1.65
SCFD1-214ENST00000554819 EXOC3O60645 756 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 FGF18O76093 207 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 PDE8BO95263 885 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 TNFSF4P23510 183 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 KIAA1614Q5VZ46 1190 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 IL31Q6EBC2 164 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 HIBCHQ6NVY1 386 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-214ENST00000554819 DPY19L3Q6ZPD9 716 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 TXLNBQ8N3L3 684 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 CYP2W1Q8TAV3 490 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 PARD3BQ8TEW8 1205 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 RIPOR3Q96MK2 946 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 SELENOOQ9BVL4 669 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 CIPCQ9C0C6 399 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 SERGEFQ9UGK8 458 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 VPS51Q9UID3 782 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 RIMKLBQ9ULI2 386 aa4.76□□□□□ -1.65
SCFD1-214ENST00000554819 LINC01548A6NM66 108 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 POC1B-GALNT4F8VUJ3 575 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 AGPSO00116 658 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 SPRY2O43597 315 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 RBMXL2O75526 392 aaKnown RBP4.75□□□□□ -1.65
SCFD1-214ENST00000554819 RBL1P28749 1068 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 ATICP31939 592 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 ALDH5A1P51649 535 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-214ENST00000554819 NEK3P51956 506 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 BTKQ06187 659 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 SLC10A2Q12908 348 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-214ENST00000554819 PROSER3Q2NL68 480 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 MAP9Q49MG5 647 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 RNASE12Q5GAN4 147 aaKnown RBP4.75□□□□□ -1.65
SCFD1-214ENST00000554819 FAXCQ5TGI0 409 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 PRAMEF17Q5VTA0 474 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 IZUMO3Q5VZ72 239 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 KIRREL2Q6UWL6 708 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 CLEC9AQ6UXN8 241 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 USP49Q70CQ1 688 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 NOL8Q76FK4 1167 aaKnown RBP4.75□□□□□ -1.65
SCFD1-214ENST00000554819 FSTL5Q8N475 847 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-214ENST00000554819 GALNT4Q8N4A0 578 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 OR2C3Q8N628 320 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 C11orf44Q8N8P7 122 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 MBD3L2Q8NHZ7 208 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-214ENST00000554819 NTN5Q8WTR8 489 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-214ENST00000554819 ABHD5Q8WTS1 349 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 CCDC17Q96LX7 622 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 FYTTD1Q96QD9 318 aaKnown RBP4.75□□□□□ -1.65
SCFD1-214ENST00000554819 MAN2B2Q9Y2E5 1009 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 SLC27A6Q9Y2P4 619 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 CEP83Q9Y592 693 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 COL15A1P39059 1388 aa4.75□□□□□ -1.65
SCFD1-214ENST00000554819 A0A087WZ62 844 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 MANSC4A6NHS7 340 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-214ENST00000554819 BTBD19C9JJ37 291 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 UBE2Q2LH0YL09 131 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 SMIM22K7EJ46 135 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 NTSR1P30989 418 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 PROK1P58294 105 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 C21orf58P58505 322 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 EIF4A1P60842 406 aaKnown RBP4.74□□□□□ -1.65
SCFD1-214ENST00000554819 TUBA4AP68366 448 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 MRPS21P82921 87 aaKnown RBP4.74□□□□□ -1.65
SCFD1-214ENST00000554819 PSG6Q00889 435 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 TFF2Q03403 129 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 GRM1Q13255 1194 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 HDAC1Q13547 482 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-214ENST00000554819 CCDC142Q17RM4 750 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 CERKLQ49MI3 558 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-214ENST00000554819 MRNIPQ6NTE8 343 aa4.74□□□□□ -1.65
SCFD1-214ENST00000554819 CRTC1Q6UUV9 634 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms