RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 KPNA1P52294 538 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 AKAP17AQ02040 695 aaKnown RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 CCDC6Q16204 474 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 IQCEQ6IPM2 695 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 SLC27A1Q6PCB7 646 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 VITQ6UXI7 678 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 ANKS3Q6ZW76 656 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 PDZD4Q76G19 769 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 TMC3Q7Z5M5 1100 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 KBTBD6Q86V97 674 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 C4orf19Q8IY42 314 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 YAF2Q8IY57 180 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 LEMD2Q8NC56 503 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 CCDC148Q8NFR7 591 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 ENOX1Q8TC92 643 aaKnown RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 GAB3Q8WWW8 586 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 INTS4Q96HW7 963 aaKnown RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 ZC3H10Q96K80 434 aaKnown RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 ZNF512Q96ME7 567 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 PAAF1Q9BRP4 392 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 NFKBIZQ9BYH8 718 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 LSG1Q9H089 658 aaKnown RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 SLKQ9H2G2 1235 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 NXF3Q9H4D5 531 aaKnown RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 ZNF552Q9H707 407 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 TRPV4Q9HBA0 871 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 GCM1Q9NP62 436 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 RBM12Q9NTZ6 932 aaKnown RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 ADAMTS1Q9UHI8 967 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 WASF3Q9UPY6 502 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 PCDHB14Q9Y5E9 798 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 CDY1Q9Y6F8 540 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 MYH6P13533 1939 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 ADAMTS20P59510 1910 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 DENND4AQ7Z401 1863 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 KLF18A0A0U1RQI7 1052 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 TMEM82A0PJX8 343 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 MYBPHLA2RUH7 354 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 TCAF2A6NFQ2 919 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 C4orf47A7E2U8 309 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 HEPACAM2A8MVW5 462 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 TMEM189-UBE2V1I3L0A0 370 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 TAF4O00268 1085 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 ARNTLO00327 626 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 CHADO15335 359 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 ATG13O75143 517 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 B3GAT3O94766 335 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 RHOBTB1O94844 696 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 NPTXRO95502 500 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 CCDC192P0DO97 292 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 ATF2P15336 505 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 CSRP1P21291 193 aaKnown RBP5.3□□□□□ -1.56
ATXN3-229ENST00000554672 POLR2BP30876 1174 aaKnown RBP5.3□□□□□ -1.56
ATXN3-229ENST00000554672 ARL2P36404 184 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 MPLP40238 635 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 RBM25P49756 843 aaKnown RBP5.3□□□□□ -1.56
ATXN3-229ENST00000554672 LINC00310P59036 64 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 DLG4P78352 724 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 CHRNEQ04844 493 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 MBTD1Q05BQ5 628 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 PPP2R5CQ13362 524 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 EMC2Q15006 297 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 EPHA7Q15375 998 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 CLEC16AQ2KHT3 1053 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 XKR9Q5GH70 373 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 SLC8B1Q6J4K2 584 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 MOXD1Q6UVY6 613 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 TTLL10Q6ZVT0 673 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 ZNF605Q86T29 641 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 RALGPS2Q86X27 583 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-229ENST00000554672 SPPL2CQ8IUH8 684 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 TCEAL8Q8IYN2 117 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 ELMOD1Q8N336 334 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 CAMKK1Q8N5S9 505 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 ANKS4BQ8N8V4 417 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 DAGLBQ8NCG7 672 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 ETNPPLQ8TBG4 499 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 TBCKQ8TEA7 893 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 HASPINQ8TF76 798 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 TCEAL4Q96EI5 215 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 TCTN2Q96GX1 697 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 FAM20AQ96MK3 541 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 ZSWIM3Q96MP5 696 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 SCNM1Q9BWG6 230 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 FOXP3Q9BZS1 431 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 SLC6A17Q9H1V8 727 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 ZSWIM4Q9H7M6 989 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 SH3GLB2Q9NR46 395 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 CACNG4Q9UBN1 327 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 NAP1L2Q9ULW6 460 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-229ENST00000554672 MAFFQ9ULX9 164 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 FAM208BQ5VWN6 2430 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 USP24Q9UPU5 2620 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 FANCMQ8IYD8 2048 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 WDR87Q6ZQQ6 2873 aa5.3□□□□□ -1.56
ATXN3-229ENST00000554672 LOXHD1Q8IVV2 1947 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 PKD1L2Q7Z442 2459 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 SPECC1L-ADORA2AF8WAN1 911 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 H7C4K7 107 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 PTGESO14684 152 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms