RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 PCNX2A6NKB5 2137 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 CACNA1EQ15878 2313 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 SGK1O00141 431 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 ARHGAP33O14559 1287 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 CETN3O15182 167 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 MAP3K13O43283 966 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 EXOC3O60645 756 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 ADAM23O75077 832 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 IL18RAPO95256 599 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 CD44P16070 742 aaKnown RBP8.23□□□□□ -1.09
ABCD4-220ENST00000553998 HDCP19113 662 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 ITPKAP23677 461 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 TNFRSF4P43489 277 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 TSPY1Q01534 308 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 GFPT1Q06210 699 aaPredicted RBP8.23□□□□□ -1.09
ABCD4-220ENST00000553998 PAK1Q13153 545 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 ADAM9Q13443 819 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 TRIP6Q15654 476 aaKnown RBP8.23□□□□□ -1.09
ABCD4-220ENST00000553998 DDR2Q16832 855 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 COL28A1Q2UY09 1125 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 EOGTQ5NDL2 527 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 ISM2Q6H9L7 571 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 C19orf48Q6RUI8 117 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 CRELD2Q6UXH1 353 aaPredicted RBP8.23□□□□□ -1.09
ABCD4-220ENST00000553998 GLRX5Q86SX6 157 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 ZC3H3Q8IXZ2 948 aaKnown RBP8.23□□□□□ -1.09
ABCD4-220ENST00000553998 CCDC33Q8N5R6 958 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 ALLCQ8N6M5 410 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 ARL14EPQ8N8R7 260 aaPredicted RBP8.23□□□□□ -1.09
ABCD4-220ENST00000553998 TXNDC5Q8NBS9 432 aaKnown RBP8.23□□□□□ -1.09
ABCD4-220ENST00000553998 SPATA18Q8TC71 538 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 NELFBQ8WX92 580 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 FUBP3Q96I24 572 aaKnown RBP eCLIP8.23□□□□□ -1.09
ABCD4-220ENST00000553998 CEP63Q96MT8 703 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 PNKPQ96T60 521 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 FAM213AQ9BRX8 229 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 PI4K2AQ9BTU6 479 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 PCIF1Q9H4Z3 704 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 CCDC86Q9H6F5 360 aaKnown RBP8.23□□□□□ -1.09
ABCD4-220ENST00000553998 DPP3Q9NY33 737 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 RWDD2AQ9UIY3 292 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 MAGED2Q9UNF1 606 aaPredicted RBP8.23□□□□□ -1.09
ABCD4-220ENST00000553998 FRMD4BQ9Y2L6 1034 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 ABCA7Q8IZY2 2146 aa8.23□□□□□ -1.09
ABCD4-220ENST00000553998 ASCC3Q8N3C0 2202 aaKnown RBP8.22□□□□□ -1.09
ABCD4-220ENST00000553998 C2orf78A6NCI8 922 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 GABRDO14764 452 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 CLIC2O15247 247 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 SLC16A3O15427 465 aaKnown RBP8.22□□□□□ -1.09
ABCD4-220ENST00000553998 AP5Z1O43299 807 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 CBFA2T3O75081 653 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 DKK1O94907 266 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 KAT7O95251 611 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 KLF8O95600 359 aaPredicted RBP8.22□□□□□ -1.09
ABCD4-220ENST00000553998 FGFR1OPO95684 399 aaKnown RBP8.22□□□□□ -1.09
ABCD4-220ENST00000553998 OLFM2O95897 454 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 CYP17A1P05093 508 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 CKMP06732 381 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 NR2F2P24468 414 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 CYP2F1P24903 491 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 PNPLA4P41247 253 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 GRIA2P42262 883 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 MAGEA11P43364 429 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 ACOT2P49753 483 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 PDE6CP51160 858 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 CYP2J2P51589 502 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 CDR1P51861 262 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 ATXN3P54252 364 aaPredicted RBP8.22□□□□□ -1.09
ABCD4-220ENST00000553998 SEC13P55735 322 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 MCCD1P59942 119 aaPredicted RBP8.22□□□□□ -1.09
ABCD4-220ENST00000553998 SLC7A9P82251 487 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 MESP2Q0VG99 397 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 PSMD6Q15008 389 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 DHCR24Q15392 516 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 SNRNP35Q16560 246 aaKnown RBP8.22□□□□□ -1.09
ABCD4-220ENST00000553998 STX1AQ16623 288 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 DPCR1Q3MIW9 517 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 SV2CQ496J9 727 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 INTS6LQ5JSJ4 861 aaKnown RBP8.22□□□□□ -1.09
ABCD4-220ENST00000553998 SDHAF4Q5VUM1 108 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 ANKRD40Q6AI12 368 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 KLHL10Q6JEL2 608 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 TTI2Q6NXR4 508 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 FAM171BQ6P995 826 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 RHBDF2Q6PJF5 856 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 SLC36A4Q6YBV0 504 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 CBWD2Q8IUF1 395 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 TMEM86AQ8N2M4 240 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 PHTF2Q8N3S3 785 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 PDCL2Q8N4E4 241 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 MINDY1Q8N5J2 469 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 STKLD1Q8NE28 680 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 CXorf38Q8TB03 319 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 TMC2Q8TDI7 906 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 SAAL1Q96ER3 474 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 SPATA17Q96L03 361 aa8.22□□□□□ -1.09
ABCD4-220ENST00000553998 RBAKQ9NYW8 714 aaPredicted RBP8.22□□□□□ -1.09
ABCD4-220ENST00000553998 GOLGA8IPA6NC78 632 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 GOLGA8JA6NMD2 632 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 LEFTY2O00292 366 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms