RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 BBS7Q8IWZ6 715 aa9.68□□□□□ -0.86
PRKCH-208ENST00000553846 FOXJ1Q92949 421 aa9.68□□□□□ -0.86
PRKCH-208ENST00000553846 PCED1BQ96HM7 432 aa9.68□□□□□ -0.86
PRKCH-208ENST00000553846 C8orf48Q96LL4 319 aa9.68□□□□□ -0.86
PRKCH-208ENST00000553846 PLIN2Q99541 437 aa9.68□□□□□ -0.86
PRKCH-208ENST00000553846 SYT15Q9BQS2 421 aa9.68□□□□□ -0.86
PRKCH-208ENST00000553846 PARVGQ9HBI0 331 aa9.68□□□□□ -0.86
PRKCH-208ENST00000553846 TM7SF3Q9NS93 570 aa9.68□□□□□ -0.86
PRKCH-208ENST00000553846 WSB2Q9NYS7 404 aaPredicted RBP9.68□□□□□ -0.86
PRKCH-208ENST00000553846 TRPM5Q9NZQ8 1165 aa9.68□□□□□ -0.86
PRKCH-208ENST00000553846 PIEZO2Q9H5I5 2752 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 TP53BP1Q12888 1972 aaPredicted RBP9.67□□□□□ -0.86
PRKCH-208ENST00000553846 FAM149AA5PLN7 773 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 TBC1D3BA6NDS4 549 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 KCNJ18B7U540 433 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 E9PAM4 449 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 FLRT2O43155 660 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 COCHO43405 550 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 TLX3O43711 291 aaPredicted RBP9.67□□□□□ -0.86
PRKCH-208ENST00000553846 CACNG3O60359 315 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 HUS1O60921 280 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 PLCG1P19174 1290 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 WASP42768 502 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 LHX1P48742 406 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 GAD2Q05329 585 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 TAF10Q12962 218 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 SNX30Q5VWJ9 437 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 DTHD1Q6ZMT9 781 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 C4orf50Q6ZRC1 276 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 GPBP1Q86WP2 473 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 DDX42Q86XP3 938 aaKnown RBP eCLIP9.67□□□□□ -0.86
PRKCH-208ENST00000553846 ZCCHC9Q8N567 271 aaKnown RBP9.67□□□□□ -0.86
PRKCH-208ENST00000553846 PDCD7Q8N8D1 485 aaKnown RBP9.67□□□□□ -0.86
PRKCH-208ENST00000553846 NAT16Q8N8M0 369 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 CADM4Q8NFZ8 388 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 PIP4K2CQ8TBX8 421 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 CDC6Q99741 560 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 LLPHQ9BRT6 129 aaKnown RBP9.67□□□□□ -0.86
PRKCH-208ENST00000553846 GAREM1Q9H706 876 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 SPHK2Q9NRA0 654 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 MARK1Q9P0L2 795 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 TBC1D14Q9P2M4 693 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 ITGA11Q9UKX5 1188 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 CDH9Q9ULB4 789 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 NOL7Q9UMY1 257 aaKnown RBP9.67□□□□□ -0.86
PRKCH-208ENST00000553846 AGAP1Q9UPQ3 857 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 SNX9Q9Y5X1 595 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 FLNCQ14315 2725 aa9.67□□□□□ -0.86
PRKCH-208ENST00000553846 FAM92AA1XBS5 289 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 F8VP50 259 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 CISD3P0C7P0 127 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 ZDHHC11BP0C7U3 371 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 GNSP15586 552 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 CD6P30203 668 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 EIF2S3P41091 472 aaKnown RBP9.66□□□□□ -0.86
PRKCH-208ENST00000553846 PGFP49763 221 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 KCNA1Q09470 495 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 MYO1EQ12965 1108 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 HLA-BQ31612 363 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 WDR45BQ5MNZ6 344 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 SYCP2LQ5T4T6 812 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 SLFN12LQ6IEE8 588 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 DPH6Q7L8W6 267 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 GALNT15Q8N3T1 639 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 MYCT1Q8N699 235 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 RBBP8NLQ8NC74 664 aaPredicted RBP9.66□□□□□ -0.86
PRKCH-208ENST00000553846 MYCBPAPQ8TBZ2 947 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 TOE1Q96GM8 510 aaKnown RBP9.66□□□□□ -0.86
PRKCH-208ENST00000553846 MKRN2Q9H000 416 aaKnown RBP9.66□□□□□ -0.86
PRKCH-208ENST00000553846 IL37Q9NZH6 218 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 DEC1Q9P2X7 70 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 RAD54BQ9Y620 910 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 TEX15Q9BXT5 2789 aa9.66□□□□□ -0.86
PRKCH-208ENST00000553846 MYH10P35580 1976 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 MYLKQ15746 1914 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 METTL12A8MUP2 240 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 WASH3PC4AMC7 463 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 GFRA2O00451 464 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 TRIM66O15016 1216 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 PAPSS1O43252 624 aaPredicted RBP9.65□□□□□ -0.86
PRKCH-208ENST00000553846 SLC26A4O43511 780 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 CER1O95813 267 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 WARSP23381 471 aaKnown RBP9.65□□□□□ -0.86
PRKCH-208ENST00000553846 ABCD1P33897 745 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 MATKP42679 507 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 TUBP50607 506 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 TFAMQ00059 246 aaKnown RBP9.65□□□□□ -0.86
PRKCH-208ENST00000553846 ZRSR1Q15695 479 aaKnown RBP9.65□□□□□ -0.86
PRKCH-208ENST00000553846 FUT11Q495W5 492 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 ZNF720Q7Z2F6 126 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 CHPFQ8IZ52 775 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 RGL4Q8IZJ4 473 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 SNIP1Q8TAD8 396 aaKnown RBP9.65□□□□□ -0.86
PRKCH-208ENST00000553846 SETD7Q8WTS6 366 aaKnown RBP9.65□□□□□ -0.86
PRKCH-208ENST00000553846 OVCA2Q8WZ82 227 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 HVCN1Q96D96 273 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 ERLEC1Q96DZ1 483 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 MTMR12Q9C0I1 747 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 PRDM16Q9HAZ2 1276 aa9.65□□□□□ -0.86
PRKCH-208ENST00000553846 ITM2CQ9NQX7 267 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms