RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 SESN3P58005 492 aa7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 MRPS5P82675 430 aaKnown RBP7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 ZNF200P98182 395 aaPredicted RBP7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 CDK16Q00536 496 aa7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 DALRD3Q5D0E6 543 aaKnown RBP7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 C4orf50Q6ZRC1 276 aa7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 DEFB132Q7Z7B7 95 aa7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 CAND1Q86VP6 1230 aaKnown RBP7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 FBXO16Q8IX29 292 aaPredicted RBP7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 PQLC3Q8N755 202 aa7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 PPM1NQ8N819 430 aa7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 C12orf29Q8N999 325 aa7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 ZNF398Q8TD17 642 aa7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 FAF2Q96CS3 445 aa7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 TMEM176AQ96HP8 235 aa7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 NAF1Q96HR8 494 aaKnown RBP7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 CPB2Q96IY4 423 aa7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 SRPK1Q96SB4 655 aaKnown RBP7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 TRIM55Q9BYV6 548 aa7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 MAGEB5Q9BZ81 275 aa7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 CITO14578 2027 aa7.22□□□□□ -1.25
LINC-ROR-201ENST00000553704 IQANK1A0A1B0GTG1 560 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 CYB561D2O14569 222 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 MAP3K13O43283 966 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 LGR5O75473 907 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 RNF8O76064 485 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 INHBAP08476 426 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 STAG3L1P0CL83 205 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 MYL2P10916 166 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 TFE3P19532 575 aaPredicted RBP7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 GPD1P21695 349 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 BLMHQ13867 455 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 VGLL4Q14135 290 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 MXD4Q14582 209 aaPredicted RBP7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 KPNB1Q14974 876 aaKnown RBP7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 SURF1Q15526 300 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 ACSBG2Q5FVE4 666 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 MDH1BQ5I0G3 518 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 SPDYAQ5MJ70 313 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 WASHC2DQ5SRD0 308 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 TRMT10BQ6PF06 316 aaKnown RBP7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 ZNF534Q76KX8 674 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 RIOX2Q8IUF8 465 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 CTAGE3PQ8IX95 158 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 MPP5Q8N3R9 675 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 CCDC110Q8TBZ0 833 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 WDR60Q8WVS4 1066 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 NRG4Q8WWG1 115 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 ALKBH8Q96BT7 664 aaKnown RBP7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 FAM167AQ96KS9 214 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 NMUR2Q9GZQ4 415 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 RPF1Q9H9Y2 349 aaKnown RBP7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 RSAD1Q9HA92 442 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 SAR1AQ9NR31 198 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 WDR35Q9P2L0 1181 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 SLC17A6Q9P2U8 582 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 NME7Q9Y5B8 376 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 HEY1Q9Y5J3 304 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 NR2E3Q9Y5X4 410 aa7.21□□□□□ -1.25
LINC-ROR-201ENST00000553704 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 HMX2A2RU54 273 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 F5H423 210 aaPredicted RBP7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 FCHO1O14526 889 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 ZBTB7AO95365 584 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 PDGFRAP16234 1089 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 RXRBP28702 533 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 PCK1P35558 622 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 NDST1P52848 882 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 IGBP1P78318 339 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 AMHR2Q16671 573 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 SH3D19Q5HYK7 790 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 NOL9Q5SY16 702 aaKnown RBP7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 GJC2Q5T442 439 aaPredicted RBP7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 OR6B2Q6IFH4 312 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 ANO7Q6IWH7 933 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 EFCAB12Q6NXP0 572 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 APBB1IPQ7Z5R6 666 aaPredicted RBP7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 TREML1Q86YW5 311 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 PCDH19Q8TAB3 1148 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 MICAL1Q8TDZ2 1067 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 HEXIM2Q96MH2 286 aaKnown RBP7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 RNF157Q96PX1 679 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 LPIN3Q9BQK8 851 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 C20orf27Q9GZN8 174 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 SPATC1LQ9H0A9 340 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 C2orf40Q9H1Z8 148 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 PDZD7Q9H5P4 517 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 IFT122Q9HBG6 1241 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 SLC24A3Q9HC58 644 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 MARCOQ9UEW3 520 aaPredicted RBP7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 TSPAN16Q9UKR8 245 aa7.21□□□□□ -1.26
LINC-ROR-201ENST00000553704 NOP56O00567 594 aaKnown RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 CHADO15335 359 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 GSC2O15499 205 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 HCRTO43612 131 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 KIF1CO43896 1103 aaKnown RBP7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 DNAJC6O75061 913 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 RFPL1O75677 317 aa7.2□□□□□ -1.26
LINC-ROR-201ENST00000553704 CNMDO75829 334 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms