RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 SCN5AQ14524 2016 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 SRRM3A6NNA2 597 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-223ENST00000553686 CDC14BO60729 498 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 RETP07949 1114 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 ZNF286BP0CG31 522 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 GHRP10912 638 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 MCCP23508 829 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 SNAP25P60880 206 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 RARS2Q5T160 578 aaKnown RBP6.76□□□□□ -1.33
ATXN3-223ENST00000553686 PLPP4Q5VZY2 271 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 TIGD7Q6NT04 549 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-223ENST00000553686 ESRP1Q6NXG1 681 aaKnown RBP6.76□□□□□ -1.33
ATXN3-223ENST00000553686 ZNF585AQ6P3V2 769 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 CCDC149Q6ZUS6 474 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 RASGRP2Q7LDG7 609 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 GGNQ86UU5 652 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 ZZZ3Q8IYH5 903 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 MRPS27Q92552 414 aaKnown RBP6.76□□□□□ -1.33
ATXN3-223ENST00000553686 CEP95Q96GE4 821 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 WWC2-AS2Q96NR7 200 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 IWS1Q96ST2 819 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 DPYSL5Q9BPU6 564 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 TCF25Q9BQ70 676 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 FAM126AQ9BYI3 521 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-223ENST00000553686 KRTAP3-1Q9BYR8 98 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 MAF1Q9H063 256 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 KLC2Q9H0B6 622 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 PRKRIP1Q9H875 184 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-223ENST00000553686 ENTPD7Q9NQZ7 604 aa6.76□□□□□ -1.33
ATXN3-223ENST00000553686 ARPP21Q9UBL0 812 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-223ENST00000553686 DBNLQ9UJU6 430 aaKnown RBP6.76□□□□□ -1.33
ATXN3-223ENST00000553686 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.76□□□□□ -1.33
ATXN3-223ENST00000553686 IGKV6D-41A0A0C4DH26 115 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 MATN2O00339 956 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 EIF3JO75822 258 aaKnown RBP6.75□□□□□ -1.33
ATXN3-223ENST00000553686 APOL3O95236 402 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 MBD4O95243 580 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 GNAI2P04899 355 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 SMIM10L2AP0DMW4 78 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 SMIM10L2BP0DMW5 78 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 MYCLP1P12525 358 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-223ENST00000553686 MAGEA9P43362 315 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 KPNA1P52294 538 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-223ENST00000553686 GYS2P54840 703 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 RPS6P62753 249 aaKnown RBP6.75□□□□□ -1.33
ATXN3-223ENST00000553686 DDX10Q13206 875 aaKnown RBP6.75□□□□□ -1.33
ATXN3-223ENST00000553686 CSRP2Q16527 193 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 ALDH1L2Q3SY69 923 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 LAIR1Q6GTX8 287 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 GIMAP6Q6P9H5 292 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 KCNV1Q6PIU1 500 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 PHYKPLQ8IUZ5 450 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 MAML2Q8IZL2 1156 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-223ENST00000553686 CELF5Q8N6W0 485 aaKnown RBP6.75□□□□□ -1.33
ATXN3-223ENST00000553686 MRPL43Q8N983 215 aaKnown RBP6.75□□□□□ -1.33
ATXN3-223ENST00000553686 OR14K1Q8NGZ2 314 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 NSUN6Q8TEA1 469 aaKnown RBP6.75□□□□□ -1.33
ATXN3-223ENST00000553686 LEO1Q8WVC0 666 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-223ENST00000553686 SPATA33Q96N06 139 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 RNPEPQ9H4A4 650 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 KCMF1Q9P0J7 381 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 CA14Q9ULX7 337 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 VWA7Q9Y334 891 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 SLC4A4Q9Y6R1 1079 aa6.75□□□□□ -1.33
ATXN3-223ENST00000553686 ZNFX1Q9P2E3 1918 aaKnown RBP6.74□□□□□ -1.33
ATXN3-223ENST00000553686 HIDE1A8MVS5 230 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 SURF6O75683 361 aaKnown RBP6.74□□□□□ -1.33
ATXN3-223ENST00000553686 PRPF6O94906 941 aaKnown RBP6.74□□□□□ -1.33
ATXN3-223ENST00000553686 CHRNA1P02708 482 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 RPLP2P05387 115 aaKnown RBP6.74□□□□□ -1.33
ATXN3-223ENST00000553686 WEE2P0C1S8 567 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 TSPY3P0CV98 308 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 TSPY8P0CW00 308 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 SCG2P13521 617 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 LAG3P18627 525 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 HOXC8P31273 242 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 BCAR1P56945 870 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 ADCY2Q08462 1091 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 LPIN1Q14693 890 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 MYBPC3Q14896 1274 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 SEPT7Q16181 437 aaKnown RBP6.74□□□□□ -1.33
ATXN3-223ENST00000553686 SBK1Q52WX2 424 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 TAF2Q6P1X5 1199 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 KLHDC10Q6PID8 442 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 DCLRE1AQ6PJP8 1040 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 SLC30A10Q6XR72 485 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 SLC44A3Q8N4M1 653 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 PJA1Q8NG27 643 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 CFHR4Q92496 578 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 MYL10Q9BUA6 226 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.74□□□□□ -1.33
ATXN3-223ENST00000553686 ARHGEF3Q9NR81 526 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 SEMA4GQ9NTN9 838 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 CDH22Q9UJ99 828 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 TCAF1Q9Y4C2 921 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 PCDHB7Q9Y5E2 793 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 SCN10AQ9Y5Y9 1956 aa6.74□□□□□ -1.33
ATXN3-223ENST00000553686 GCN1Q92616 2671 aaKnown RBP6.74□□□□□ -1.33
ATXN3-223ENST00000553686 NAV2Q8IVL1 2488 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms