RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 SYN2Q92777 582 aaPredicted RBP14.54□□□□□ -0.08
TUBB3-202ENST00000553656 ELSPBP1Q96BH3 223 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 AGPAT1Q99943 283 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 KXD1Q9BQD3 176 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 TRIM62Q9BVG3 475 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 SLC4A5Q9BY07 1137 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 KIF9Q9HAQ2 790 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 KCNK12Q9HB15 430 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 TRPV4Q9HBA0 871 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 TDP1Q9NUW8 608 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 CLIC5Q9NZA1 410 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 DOCK8Q8NF50 2099 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 ZNF638Q14966 1978 aaKnown RBP14.53□□□□□ -0.08
TUBB3-202ENST00000553656 OBSL1O75147 1896 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 OAS1P00973 400 aaKnown RBP14.53□□□□□ -0.08
TUBB3-202ENST00000553656 RARGP13631 454 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 TNFAIP3P21580 790 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 CASP14P31944 242 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 CDH5P33151 784 aaPredicted RBP14.53□□□□□ -0.08
TUBB3-202ENST00000553656 ZNF75DP51815 510 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 DAOAP59103 153 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 FMO1Q01740 532 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 GOLGA8FQ08AF8 430 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 GOLGA8DPQ0D2H9 430 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 TDGQ13569 410 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 TDRD12Q587J7 1177 aaKnown RBP14.53□□□□□ -0.08
TUBB3-202ENST00000553656 C10orf120Q5SQS8 335 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 TANGO2Q6ICL3 276 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 TOGARAM2Q6ZUX3 1019 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 TMC6Q7Z403 805 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 IRF2BP2Q7Z5L9 587 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 TMEM110Q86TL2 294 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 VPS36Q86VN1 386 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 ERICH1Q86X53 443 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 WDTC1Q8N5D0 677 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 CELF5Q8N6W0 485 aaKnown RBP14.53□□□□□ -0.08
TUBB3-202ENST00000553656 TTC16Q8NEE8 873 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 ST13P5Q8NFI4 369 aaPredicted RBP14.53□□□□□ -0.08
TUBB3-202ENST00000553656 RNF139Q8WU17 664 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 DEPDC1BQ8WUY9 529 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 FGF14Q92915 247 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 FAM149B1Q96BN6 582 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 CPXM1Q96SM3 734 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 SMG9Q9H0W8 520 aaKnown RBP14.53□□□□□ -0.08
TUBB3-202ENST00000553656 CCSER2Q9H7U1 834 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 NMUR1Q9HB89 426 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 ZNHIT6Q9NWK9 470 aaKnown RBP14.53□□□□□ -0.08
TUBB3-202ENST00000553656 OBP2AQ9NY56 170 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 CYTH4Q9UIA0 394 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 ARHGAP26Q9UNA1 814 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 SORCS3Q9UPU3 1222 aa14.53□□□□□ -0.08
TUBB3-202ENST00000553656 BZW2Q9Y6E2 419 aaKnown RBP14.53□□□□□ -0.08
TUBB3-202ENST00000553656 HEPACAM2A8MVW5 462 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 AP5Z1O43299 807 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 COCHO43405 550 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 PRAMEF12O95522 483 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 CHRNB2P17787 502 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 FCARP24071 287 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 ATP5C1P36542 298 aaKnown RBP14.52□□□□□ -0.09
TUBB3-202ENST00000553656 VIPR2P41587 438 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 PRKCIP41743 596 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 NSFP46459 744 aaKnown RBP14.52□□□□□ -0.09
TUBB3-202ENST00000553656 RPL34P49207 117 aaKnown RBP14.52□□□□□ -0.09
TUBB3-202ENST00000553656 NOMO3P69849 1222 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 ZNF268Q14587 947 aaPredicted RBP14.52□□□□□ -0.09
TUBB3-202ENST00000553656 PTPN20Q4JDL3 420 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 BSPRYQ5W0U4 402 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 OR6B2Q6IFH4 312 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 CC2D1AQ6P1N0 951 aaPredicted RBP14.52□□□□□ -0.09
TUBB3-202ENST00000553656 SCD5Q86SK9 330 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 DDX42Q86XP3 938 aaKnown RBP eCLIP14.52□□□□□ -0.09
TUBB3-202ENST00000553656 ZDHHC17Q8IUH5 632 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 SCUBE3Q8IX30 993 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 BPIFB1Q8TDL5 484 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 RSAD2Q8WXG1 361 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 CPA5Q8WXQ8 436 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 NDRG1Q92597 394 aaKnown RBP14.52□□□□□ -0.09
TUBB3-202ENST00000553656 MRFAP1L1Q96HT8 127 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 SLC22A12Q96S37 553 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 CYP2S1Q96SQ9 504 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 HAUS4Q9H6D7 363 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 CD320Q9NPF0 282 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 ABCC13Q9NSE7 274 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 OLA1Q9NTK5 396 aaKnown RBP14.52□□□□□ -0.09
TUBB3-202ENST00000553656 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.52□□□□□ -0.09
TUBB3-202ENST00000553656 THG1LQ9NWX6 298 aaKnown RBP14.52□□□□□ -0.09
TUBB3-202ENST00000553656 SMPD4Q9NXE4 827 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 DNMT3LQ9UJW3 386 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 STRIP2Q9ULQ0 834 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 CPQQ9Y646 472 aa14.52□□□□□ -0.09
TUBB3-202ENST00000553656 DENND4CQ5VZ89 1909 aa14.51□□□□□ -0.09
TUBB3-202ENST00000553656 NUP210Q8TEM1 1887 aaPredicted RBP14.51□□□□□ -0.09
TUBB3-202ENST00000553656 YJEFN3A6XGL0 299 aa14.51□□□□□ -0.09
TUBB3-202ENST00000553656 E7ENQ6 273 aa14.51□□□□□ -0.09
TUBB3-202ENST00000553656 CAPN9O14815 690 aa14.51□□□□□ -0.09
TUBB3-202ENST00000553656 PAPSS1O43252 624 aaPredicted RBP14.51□□□□□ -0.09
TUBB3-202ENST00000553656 OLFM2O95897 454 aa14.51□□□□□ -0.09
TUBB3-202ENST00000553656 LTFP02788 710 aa14.51□□□□□ -0.09
TUBB3-202ENST00000553656 CYP1A1P04798 512 aaPredicted RBP14.51□□□□□ -0.09
TUBB3-202ENST00000553656 SERPING1P05155 500 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms