RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 MTF1Q14872 753 aa24■■□□□ 1.43
TDP1-206ENST00000553569 FILIP1LQ4L180 1135 aa24■■□□□ 1.43
TDP1-206ENST00000553569 ARHGAP29Q52LW3 1261 aa24■■□□□ 1.43
TDP1-206ENST00000553569 PMF1Q6P1K2 205 aa24■■□□□ 1.43
TDP1-206ENST00000553569 SLC47A2Q86VL8 602 aa24■■□□□ 1.43
TDP1-206ENST00000553569 FAM71AQ8IYT1 594 aa24■■□□□ 1.43
TDP1-206ENST00000553569 NEK11Q8NG66 645 aa24■■□□□ 1.43
TDP1-206ENST00000553569 SLC35F5Q8WV83 523 aa24■■□□□ 1.43
TDP1-206ENST00000553569 NDRG1Q92597 394 aaKnown RBP24■■□□□ 1.43
TDP1-206ENST00000553569 DNASE1L2Q92874 299 aa24■■□□□ 1.43
TDP1-206ENST00000553569 ERGIC2Q96RQ1 377 aa24■■□□□ 1.43
TDP1-206ENST00000553569 STK33Q9BYT3 514 aa24■■□□□ 1.43
TDP1-206ENST00000553569 NLRC4Q9NPP4 1024 aa24■■□□□ 1.43
TDP1-206ENST00000553569 HEBP1Q9NRV9 189 aa24■■□□□ 1.43
TDP1-206ENST00000553569 TEX33O43247 280 aa23.99■■□□□ 1.43
TDP1-206ENST00000553569 ZBED1O96006 694 aa23.99■■□□□ 1.43
TDP1-206ENST00000553569 SERPINC1P01008 464 aa23.99■■□□□ 1.43
TDP1-206ENST00000553569 RARGP13631 454 aa23.99■■□□□ 1.43
TDP1-206ENST00000553569 MLF2Q15773 248 aaPredicted RBP23.99■■□□□ 1.43
TDP1-206ENST00000553569 SLC44A4Q53GD3 710 aa23.99■■□□□ 1.43
TDP1-206ENST00000553569 CC2D1AQ6P1N0 951 aaPredicted RBP23.99■■□□□ 1.43
TDP1-206ENST00000553569 SCD5Q86SK9 330 aa23.99■■□□□ 1.43
TDP1-206ENST00000553569 PASD1Q8IV76 773 aa23.99■■□□□ 1.43
TDP1-206ENST00000553569 FLCNQ8NFG4 579 aa23.99■■□□□ 1.43
TDP1-206ENST00000553569 CSGALNACT1Q8TDX6 532 aa23.99■■□□□ 1.43
TDP1-206ENST00000553569 KCTD13Q8WZ19 329 aa23.99■■□□□ 1.43
TDP1-206ENST00000553569 TSPY26PQ9H489 355 aa23.99■■□□□ 1.43
TDP1-206ENST00000553569 RTN4Q9NQC3 1192 aaKnown RBP23.99■■□□□ 1.43
TDP1-206ENST00000553569 NUDT5Q9UKK9 219 aa23.99■■□□□ 1.43
TDP1-206ENST00000553569 TRIOO75962 3097 aa23.98■■□□□ 1.43
TDP1-206ENST00000553569 LEFTY2O00292 366 aa23.98■■□□□ 1.43
TDP1-206ENST00000553569 ZXDBP98169 803 aa23.98■■□□□ 1.43
TDP1-206ENST00000553569 TRIM68Q6AZZ1 485 aa23.98■■□□□ 1.43
TDP1-206ENST00000553569 TTC8Q8TAM2 541 aa23.98■■□□□ 1.43
TDP1-206ENST00000553569 SPAG5Q96R06 1193 aa23.98■■□□□ 1.43
TDP1-206ENST00000553569 CYLDQ9NQC7 956 aa23.98■■□□□ 1.43
TDP1-206ENST00000553569 ST7Q9NRC1 585 aa23.98■■□□□ 1.43
TDP1-206ENST00000553569 GKN1Q9NS71 199 aa23.98■■□□□ 1.43
TDP1-206ENST00000553569 ARNTLO00327 626 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 STK25O00506 426 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 SCAMP3O14828 347 aaKnown RBP23.97■■□□□ 1.43
TDP1-206ENST00000553569 MDM4O15151 490 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 GABBR2O75899 941 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 TBX18O95935 607 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 RALAP11233 206 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 GPD2P43304 727 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 PSEN1P49768 467 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 BPIFB4P59827 614 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 YWHAGP61981 247 aaKnown RBP eCLIP23.97■■□□□ 1.43
TDP1-206ENST00000553569 PLCB2Q00722 1185 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 TNK2Q07912 1038 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 C10orf120Q5SQS8 335 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 SMYD5Q6GMV2 418 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 LRSAM1Q6UWE0 723 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 TPRG1Q6ZUI0 275 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 BMP8AQ7Z5Y6 402 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 ARHGAP18Q8N392 663 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 TBC1D17Q9HA65 648 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.97■■□□□ 1.43
TDP1-206ENST00000553569 CFAP97Q9P2B7 532 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 WNT6Q9Y6F9 365 aa23.97■■□□□ 1.43
TDP1-206ENST00000553569 GFPT2O94808 682 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 IRF1P10914 325 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 TCF3P15923 654 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 KRT9P35527 623 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 IFNAR2P48551 515 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 MEA1Q16626 185 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 PM20D1Q6GTS8 502 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 BHLHA9Q7RTU4 235 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 SUGP1Q8IWZ8 645 aaKnown RBP23.96■■□□□ 1.43
TDP1-206ENST00000553569 FBXL6Q8N531 539 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 HSFY1Q96LI6 401 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 NAP1L5Q96NT1 182 aaPredicted RBP23.96■■□□□ 1.43
TDP1-206ENST00000553569 MIS12Q9H081 205 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 EBF3Q9H4W6 596 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 CNGB3Q9NQW8 809 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 GTSE1Q9NYZ3 720 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 CYTH4Q9UIA0 394 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 DAAM1Q9Y4D1 1078 aa23.96■■□□□ 1.43
TDP1-206ENST00000553569 A0A1B0GTH6 734 aa23.95■■□□□ 1.42
TDP1-206ENST00000553569 ARSAP15289 507 aa23.95■■□□□ 1.42
TDP1-206ENST00000553569 CYP11B1P15538 503 aa23.95■■□□□ 1.42
TDP1-206ENST00000553569 ATP5C1P36542 298 aaKnown RBP23.95■■□□□ 1.42
TDP1-206ENST00000553569 KPNA1P52294 538 aaPredicted RBP23.95■■□□□ 1.42
TDP1-206ENST00000553569 JAM2P57087 298 aa23.95■■□□□ 1.42
TDP1-206ENST00000553569 DAOAP59103 153 aa23.95■■□□□ 1.42
TDP1-206ENST00000553569 FANCCQ00597 558 aa23.95■■□□□ 1.42
TDP1-206ENST00000553569 TAF3Q5VWG9 929 aa23.95■■□□□ 1.42
TDP1-206ENST00000553569 CWF19L1Q69YN2 538 aaKnown RBP23.95■■□□□ 1.42
TDP1-206ENST00000553569 RSRC2Q7L4I2 434 aaKnown RBP23.95■■□□□ 1.42
TDP1-206ENST00000553569 TADA2BQ86TJ2 420 aa23.95■■□□□ 1.42
TDP1-206ENST00000553569 DDX42Q86XP3 938 aaKnown RBP eCLIP23.95■■□□□ 1.42
TDP1-206ENST00000553569 CLEC4CQ8WTT0 213 aa23.95■■□□□ 1.42
TDP1-206ENST00000553569 SHDQ96IW2 340 aa23.95■■□□□ 1.42
TDP1-206ENST00000553569 ZFRQ96KR1 1074 aaKnown RBP23.95■■□□□ 1.42
TDP1-206ENST00000553569 PDCL3Q9H2J4 239 aa23.95■■□□□ 1.42
TDP1-206ENST00000553569 TRPV5Q9NQA5 729 aa23.95■■□□□ 1.42
TDP1-206ENST00000553569 DUS2Q9NX74 493 aaKnown RBP23.95■■□□□ 1.42
TDP1-206ENST00000553569 CLIC5Q9NZA1 410 aa23.95■■□□□ 1.42
TDP1-206ENST00000553569 PCDHGC3Q9UN70 934 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms