RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 TUBB4BP68371 445 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 ATP11AP98196 1134 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 KRT17Q04695 432 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 DDR2Q16832 855 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 TEX35Q5T0J7 233 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 TXNRD3NBQ6F5E7 133 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 TTC9BQ8N6N2 239 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 NOA1Q8NC60 698 aaKnown RBP18.4■□□□□ 0.54
PSEN1-206ENST00000553447 FAM172AQ8WUF8 416 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 UBXN4Q92575 508 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 CENPIQ92674 756 aaPredicted RBP18.4■□□□□ 0.54
PSEN1-206ENST00000553447 NAP1L3Q99457 506 aaPredicted RBP18.4■□□□□ 0.54
PSEN1-206ENST00000553447 CLSTN3Q9BQT9 956 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 POPDC2Q9HBU9 364 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 NGRNQ9NPE2 291 aaKnown RBP18.4■□□□□ 0.54
PSEN1-206ENST00000553447 USP18Q9UMW8 372 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 ZRANB2O95218 330 aaKnown RBP eCLIP18.39■□□□□ 0.53
PSEN1-206ENST00000553447 TRUB2O95900 331 aaKnown RBP18.39■□□□□ 0.53
PSEN1-206ENST00000553447 LTFP02788 710 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 KRT1P04264 644 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 IL1R2P27930 398 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 NAA30Q147X3 362 aaPredicted RBP18.39■□□□□ 0.53
PSEN1-206ENST00000553447 LONRF2Q1L5Z9 754 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 SLC25A52Q3SY17 297 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 ATP13A4Q4VNC1 1196 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 RAB6CQ53S08 254 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 STRADAQ7RTN6 431 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 SLC13A5Q86YT5 568 aaPredicted RBP18.39■□□□□ 0.53
PSEN1-206ENST00000553447 RCOR2Q8IZ40 523 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 VPS52Q8N1B4 723 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 NUP93Q8N1F7 819 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 SCAMP5Q8TAC9 235 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 RBM41Q96IZ5 413 aaKnown RBP18.39■□□□□ 0.53
PSEN1-206ENST00000553447 PEBP4Q96S96 227 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 RAB6CQ9H0N0 254 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 CRISPLD1Q9H336 500 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 ZWILCHQ9H900 591 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 RBM12Q9NTZ6 932 aaKnown RBP18.39■□□□□ 0.53
PSEN1-206ENST00000553447 KLHL11Q9NVR0 708 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 PCSK1NQ9UHG2 260 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 STAP1Q9ULZ2 295 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 SLC27A5Q9Y2P5 690 aa18.39■□□□□ 0.53
PSEN1-206ENST00000553447 LCHNA4D1U4 455 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 FYNP06241 537 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 TFE3P19532 575 aaPredicted RBP18.38■□□□□ 0.53
PSEN1-206ENST00000553447 SULT1E1P49888 294 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 HDAC4P56524 1084 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 DUSP4Q13115 394 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 ERCC6LQ2NKX8 1250 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 MGAT5BQ3V5L5 792 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 DCAF6Q58WW2 860 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 ZFYVE27Q5T4F4 411 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 SDHAF4Q5VUM1 108 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 GPR65Q8IYL9 337 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 MMGT1Q8N4V1 131 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 NT5C3BQ969T7 300 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 TBCBQ99426 244 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 NPY6RQ99463 290 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 SEPT5Q99719 369 aaPredicted RBP18.38■□□□□ 0.53
PSEN1-206ENST00000553447 TRIM62Q9BVG3 475 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 ADAM33Q9BZ11 813 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 ZBP1Q9H171 429 aa18.38■□□□□ 0.53
PSEN1-206ENST00000553447 AFF4Q9UHB7 1163 aaKnown RBP18.38■□□□□ 0.53
PSEN1-206ENST00000553447 CCDC85CA6NKD9 419 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 CCDC188H7C350 402 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 KRIT1O00522 736 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 CAPN9O14815 690 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 PRPSAP2O60256 369 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 SOAT2O75908 522 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 RPL10AP62906 217 aaKnown RBP18.37■□□□□ 0.53
PSEN1-206ENST00000553447 IFRD2Q12894 506 aaPredicted RBP18.37■□□□□ 0.53
PSEN1-206ENST00000553447 SMC1AQ14683 1233 aaKnown RBP18.37■□□□□ 0.53
PSEN1-206ENST00000553447 COL13A1Q5TAT6 717 aaPredicted RBP18.37■□□□□ 0.53
PSEN1-206ENST00000553447 OTUD1Q5VV17 481 aaPredicted RBP18.37■□□□□ 0.53
PSEN1-206ENST00000553447 SYPL2Q5VXT5 272 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 CYP4V2Q6ZWL3 525 aaPredicted RBP18.37■□□□□ 0.53
PSEN1-206ENST00000553447 BEND5Q7L4P6 421 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 BNIPLQ7Z465 357 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 CCDC50Q8IVM0 306 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 KLHL23Q8NBE8 558 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 RNF25Q96BH1 459 aaPredicted RBP18.37■□□□□ 0.53
PSEN1-206ENST00000553447 ACSF2Q96CM8 615 aaPredicted RBP18.37■□□□□ 0.53
PSEN1-206ENST00000553447 SPATA17Q96L03 361 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 SLITRK1Q96PX8 696 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 AP1M1Q9BXS5 423 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 FBXO44Q9H4M3 255 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 MRPL17Q9NRX2 175 aaKnown RBP18.37■□□□□ 0.53
PSEN1-206ENST00000553447 NAALADL1Q9UQQ1 740 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 SCML2Q9UQR0 700 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 SSX2IPQ9Y2D8 614 aa18.37■□□□□ 0.53
PSEN1-206ENST00000553447 PI4K2BG5E9Z4 385 aa18.36■□□□□ 0.53
PSEN1-206ENST00000553447 FSCN2O14926 492 aa18.36■□□□□ 0.53
PSEN1-206ENST00000553447 LILRB3O75022 631 aa18.36■□□□□ 0.53
PSEN1-206ENST00000553447 ENDOD1O94919 500 aa18.36■□□□□ 0.53
PSEN1-206ENST00000553447 ABLIM3O94929 683 aa18.36■□□□□ 0.53
PSEN1-206ENST00000553447 RARAP10276 462 aa18.36■□□□□ 0.53
PSEN1-206ENST00000553447 CTSAP10619 480 aa18.36■□□□□ 0.53
PSEN1-206ENST00000553447 DNAJB2P25686 324 aa18.36■□□□□ 0.53
PSEN1-206ENST00000553447 CETN2P41208 172 aa18.36■□□□□ 0.53
PSEN1-206ENST00000553447 MKI67P46013 3256 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms