RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 ZPBP2Q6X784 338 aa18.25■□□□□ 0.51
SYNE3-202ENST00000553340 FLAD1Q8NFF5 587 aa18.25■□□□□ 0.51
SYNE3-202ENST00000553340 SLC13A1Q9BZW2 595 aa18.25■□□□□ 0.51
SYNE3-202ENST00000553340 ASCC2Q9H1I8 757 aaPredicted RBP18.25■□□□□ 0.51
SYNE3-202ENST00000553340 RAB6BQ9NRW1 208 aa18.25■□□□□ 0.51
SYNE3-202ENST00000553340 ZC3H7BQ9UGR2 993 aaKnown RBP18.25■□□□□ 0.51
SYNE3-202ENST00000553340 SLC7A8Q9UHI5 535 aa18.25■□□□□ 0.51
SYNE3-202ENST00000553340 MAFBQ9Y5Q3 323 aaPredicted RBP18.25■□□□□ 0.51
SYNE3-202ENST00000553340 ANKRD33BA6NCL7 494 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 SPATA31C2B4DYI2 1134 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 TRDMT1O14717 391 aaKnown RBP18.24■□□□□ 0.51
SYNE3-202ENST00000553340 ADCY3O60266 1144 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 TRUB2O95900 331 aaKnown RBP18.24■□□□□ 0.51
SYNE3-202ENST00000553340 C1QAP02745 245 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 LYNP07948 512 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 KITP10721 976 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 YWHAZP63104 245 aaKnown RBP18.24■□□□□ 0.51
SYNE3-202ENST00000553340 MTMR2Q13614 643 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 ACAP1Q15027 740 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 XYLT1Q86Y38 959 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 RAB3IL1Q8TBN0 382 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 WNK4Q96J92 1243 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 CLPTM1LQ96KA5 538 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 RILPQ96NA2 401 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 ETAA1Q9NY74 926 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 PAK5Q9P286 719 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 CCDC195A0A1B0GUA6 201 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 H7C0C1 242 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 CCNFP41002 786 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 ASPAP45381 313 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 ATP5OP48047 213 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 CBLBQ13191 982 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 CCNJLQ8IV13 435 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 MTBPQ96DY7 904 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 CPXM1Q96SM3 734 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 TTC1Q99614 292 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 ECSITQ9BQ95 431 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 CCDC106Q9BWC9 280 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 C1orf21Q9H246 121 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 GPAMQ9HCL2 828 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 MKS1Q9NXB0 559 aa18.24■□□□□ 0.51
SYNE3-202ENST00000553340 MARCOQ9UEW3 520 aaPredicted RBP18.24■□□□□ 0.51
SYNE3-202ENST00000553340 CXorf49A8MYA2 514 aaPredicted RBP18.23■□□□□ 0.51
SYNE3-202ENST00000553340 RFPL1O75677 317 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 KRT38O76015 456 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 BAG2O95816 211 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 ALDH18A1P54886 795 aaKnown RBP18.23■□□□□ 0.51
SYNE3-202ENST00000553340 TFAMQ00059 246 aaKnown RBP18.23■□□□□ 0.51
SYNE3-202ENST00000553340 MMRN1Q13201 1228 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 CAPSQ13938 189 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 TFDP2Q14188 446 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 SURF1Q15526 300 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 TEX44Q53QW1 395 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 TRPC5Q9UL62 973 aaPredicted RBP18.23■□□□□ 0.51
SYNE3-202ENST00000553340 KLHL33A6NCF5 533 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 DCAF8L1A6NGE4 600 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 FAM189A1O60320 539 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 TOM1L1O75674 476 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 SERPINA6P08185 405 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 PRKCHP24723 683 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 CRABP2P29373 138 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 CDH6P55285 790 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 FAM47CQ5HY64 1035 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 SNRNP48Q6IEG0 339 aaKnown RBP18.23■□□□□ 0.51
SYNE3-202ENST00000553340 MTMR14Q8NCE2 650 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 ZNF395Q9H8N7 513 aaPredicted RBP18.23■□□□□ 0.51
SYNE3-202ENST00000553340 POPDC2Q9HBU9 364 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 ASNSD1Q9NWL6 643 aa18.23■□□□□ 0.51
SYNE3-202ENST00000553340 TTLL13PA6NNM8 815 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 CYB561D2O14569 222 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 FKBP6O75344 327 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 ERBB2P04626 1255 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 OSBPP22059 807 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 ERFP50548 548 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 CES4AQ5XG92 561 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 SESTD1Q86VW0 696 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.22■□□□□ 0.51
SYNE3-202ENST00000553340 ZNF526Q8TF50 670 aaPredicted RBP18.22■□□□□ 0.51
SYNE3-202ENST00000553340 NXF1Q9UBU9 619 aaKnown RBP18.22■□□□□ 0.51
SYNE3-202ENST00000553340 HBS1LQ9Y450 684 aaKnown RBP18.22■□□□□ 0.51
SYNE3-202ENST00000553340 PRR5-ARHGAP8B1AHC4 643 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 ITGBL1O95965 494 aaPredicted RBP18.22■□□□□ 0.51
SYNE3-202ENST00000553340 ZCCHC18P0CG32 403 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 ARHGAP8P85298 464 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 BMPR2Q13873 1038 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 TMCO4Q5TGY1 634 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 SMYD5Q6GMV2 418 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 KYAT3Q6YP21 454 aaKnown RBP18.22■□□□□ 0.51
SYNE3-202ENST00000553340 SLC4A11Q8NBS3 891 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 DDX50Q9BQ39 737 aaKnown RBP18.22■□□□□ 0.51
SYNE3-202ENST00000553340 CCDC28BQ9BUN5 200 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 MRPL4Q9BYD3 311 aaKnown RBP18.22■□□□□ 0.51
SYNE3-202ENST00000553340 NIFKQ9BYG3 293 aaKnown RBP18.22■□□□□ 0.51
SYNE3-202ENST00000553340 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.22■□□□□ 0.51
SYNE3-202ENST00000553340 KAT6AQ92794 2004 aa18.22■□□□□ 0.51
SYNE3-202ENST00000553340 OGTO15294 1046 aa18.21■□□□□ 0.51
SYNE3-202ENST00000553340 SNNO75324 88 aaPredicted RBP18.21■□□□□ 0.51
SYNE3-202ENST00000553340 RTN3O95197 1032 aaPredicted RBP18.21■□□□□ 0.51
SYNE3-202ENST00000553340 ARHGAP18Q8N392 663 aa18.21■□□□□ 0.51
SYNE3-202ENST00000553340 XYLT2Q9H1B5 865 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms