RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 TUBGCP2Q9BSJ2 902 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 LINC00597Q9H2U6 94 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 CHRDQ9H2X0 955 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 NDST4Q9H3R1 872 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 CCSER2Q9H7U1 834 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 LRRC4Q9HBW1 653 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 SMPD4Q9NXE4 827 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 CFAP97Q9P2B7 532 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 FBXO4Q9UKT5 387 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 CNTN6Q9UQ52 1028 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 SH3BP1Q9Y3L3 701 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 WNT6Q9Y6F9 365 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 NUP210Q8TEM1 1887 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-204ENST00000553324 RNF225M0QZC1 329 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-204ENST00000553324 CYP26A1O43174 497 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 ZBED1O96006 694 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 RARGP13631 454 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 KRT5P13647 590 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 ARSAP15289 507 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 DRD1P21728 446 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 EEF1GP26641 437 aaKnown RBP16.14■□□□□ 0.17
SHMT2-204ENST00000553324 PLA2G4AP47712 749 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 PDE4CQ08493 712 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 ZNF528Q3MIS6 628 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 PM20D1Q6GTS8 502 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 ARHGEF19Q8IW93 802 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 RBBP8NLQ8NC74 664 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-204ENST00000553324 CCDC26Q8TAB7 109 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 KCTD13Q8WZ19 329 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 KAT5Q92993 513 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 CRACR2AQ9BSW2 395 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.14■□□□□ 0.17
SHMT2-204ENST00000553324 APEX2Q9UBZ4 518 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 DNMT3LQ9UJW3 386 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 NAGPAQ9UK23 515 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 F5P12259 2224 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 MUC6Q6W4X9 2439 aa16.14■□□□□ 0.17
SHMT2-204ENST00000553324 A0A1W2PQH9 124 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 OTOL1A6NHN0 477 aaPredicted RBP16.13■□□□□ 0.17
SHMT2-204ENST00000553324 KCNJ18B7U540 433 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 MED7O43513 233 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 TPM2P07951 284 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 SLC9A1P19634 815 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 PON1P27169 355 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 GJA4P35212 333 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 TKTL1P51854 596 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 ZNF132P52740 706 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 KCNJ12Q14500 433 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 PON2Q15165 354 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 TCP11X2Q5H9J9 407 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 TMEM196Q5HYL7 178 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 TXNDC11Q6PKC3 985 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 UBA3Q8TBC4 463 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 HSFY1Q96LI6 401 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 KREMEN1Q96MU8 473 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.13■□□□□ 0.17
SHMT2-204ENST00000553324 NFE2L3Q9Y4A8 694 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 GREB1Q4ZG55 1949 aa16.13■□□□□ 0.17
SHMT2-204ENST00000553324 KMT2EQ8IZD2 1858 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 TBX18O95935 607 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 GALK1P51570 392 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 CCR3P51677 355 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 COG7P83436 770 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 CCINQ13939 588 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 STX1AQ16623 288 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 MEA1Q16626 185 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 FBXO43Q4G163 708 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 PREPLQ4J6C6 727 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-204ENST00000553324 PKDCCQ504Y2 493 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 C10orf120Q5SQS8 335 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 ZC3H14Q6PJT7 736 aaKnown RBP16.12■□□□□ 0.17
SHMT2-204ENST00000553324 HTR3DQ70Z44 454 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 SIX6OS1Q8N1H7 587 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 SCML4Q8N228 414 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 SPEM1Q8N4L4 309 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 SLC35F5Q8WV83 523 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 TFAP2BQ92481 460 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 ZFRQ96KR1 1074 aaKnown RBP16.12■□□□□ 0.17
SHMT2-204ENST00000553324 P2RY13Q9BPV8 354 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 KLF16Q9BXK1 252 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-204ENST00000553324 FAM126AQ9BYI3 521 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-204ENST00000553324 SEMA4AQ9H3S1 761 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 NMUR1Q9HB89 426 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 CNGB3Q9NQW8 809 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 SAMSN1Q9NSI8 373 aaKnown RBP16.12■□□□□ 0.17
SHMT2-204ENST00000553324 OSER1Q9NX31 292 aa16.12■□□□□ 0.17
SHMT2-204ENST00000553324 LSM7Q9UK45 103 aaKnown RBP16.12■□□□□ 0.17
SHMT2-204ENST00000553324 DENND4CQ5VZ89 1909 aa16.11■□□□□ 0.17
SHMT2-204ENST00000553324 PROB1E7EW31 1015 aa16.11■□□□□ 0.17
SHMT2-204ENST00000553324 PES1O00541 588 aaKnown RBP16.11■□□□□ 0.17
SHMT2-204ENST00000553324 ATG13O75143 517 aa16.11■□□□□ 0.17
SHMT2-204ENST00000553324 ADH1CP00326 375 aa16.11■□□□□ 0.17
SHMT2-204ENST00000553324 SP9P0CG40 484 aa16.11■□□□□ 0.17
SHMT2-204ENST00000553324 NBL1P41271 181 aa16.11■□□□□ 0.17
SHMT2-204ENST00000553324 PGFP49763 221 aa16.11■□□□□ 0.17
SHMT2-204ENST00000553324 NRLP54845 237 aa16.11■□□□□ 0.17
SHMT2-204ENST00000553324 YWHAGP61981 247 aaKnown RBP eCLIP16.11■□□□□ 0.17
SHMT2-204ENST00000553324 MTAPQ13126 283 aa16.11■□□□□ 0.17
SHMT2-204ENST00000553324 DHCR24Q15392 516 aa16.11■□□□□ 0.17
SHMT2-204ENST00000553324 SCD5Q86SK9 330 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms