RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 ZFYVE19Q96K21 471 aa14.85□□□□□ -0.03
PTCH1-226ENST00000553011 SPAG5Q96R06 1193 aa14.85□□□□□ -0.03
PTCH1-226ENST00000553011 BRD9Q9H8M2 597 aa14.85□□□□□ -0.03
PTCH1-226ENST00000553011 KIF9Q9HAQ2 790 aa14.85□□□□□ -0.03
PTCH1-226ENST00000553011 SMPD4Q9NXE4 827 aa14.85□□□□□ -0.03
PTCH1-226ENST00000553011 CYTH4Q9UIA0 394 aa14.85□□□□□ -0.03
PTCH1-226ENST00000553011 NAGPAQ9UK23 515 aa14.85□□□□□ -0.03
PTCH1-226ENST00000553011 NUDT5Q9UKK9 219 aa14.85□□□□□ -0.03
PTCH1-226ENST00000553011 FBXL21Q9UKT6 434 aa14.85□□□□□ -0.03
PTCH1-226ENST00000553011 CA14Q9ULX7 337 aa14.85□□□□□ -0.03
PTCH1-226ENST00000553011 ARHGAP26Q9UNA1 814 aa14.85□□□□□ -0.03
PTCH1-226ENST00000553011 CPQQ9Y646 472 aa14.85□□□□□ -0.03
PTCH1-226ENST00000553011 MIA3Q5JRA6 1907 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 TLR5O60602 858 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 GFPT2O94808 682 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 TBX18O95935 607 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 ZBED1O96006 694 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 PDGFBP01127 241 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-226ENST00000553011 MBL2P11226 248 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-226ENST00000553011 RARGP13631 454 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 SOX5P35711 763 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 TUBP50607 506 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 BPIFB4P59827 614 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 SLC7A9P82251 487 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 USP4Q13107 963 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 ZNF77Q15935 545 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 MEA1Q16626 185 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 PM20D1Q6GTS8 502 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 SIX6OS1Q8N1H7 587 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 SH3RF2Q8TEC5 729 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 HSFY1Q96LI6 401 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 ST7Q9NRC1 585 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.84□□□□□ -0.03
PTCH1-226ENST00000553011 PCDHGC3Q9UN70 934 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 DAAM1Q9Y4D1 1078 aa14.84□□□□□ -0.03
PTCH1-226ENST00000553011 A0A1W2PQC6 194 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 KRBA1A5PL33 1030 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 ZNF263O14978 683 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 MDM4O15151 490 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 CYP11B1P15538 503 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 KRT9P35527 623 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 RPL34P49207 117 aaKnown RBP14.83□□□□□ -0.04
PTCH1-226ENST00000553011 UBASH3AP57075 661 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 ARHGAP29Q52LW3 1261 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 TAF3Q5VWG9 929 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 NOP9Q86U38 636 aaKnown RBP14.83□□□□□ -0.04
PTCH1-226ENST00000553011 WDTC1Q8N5D0 677 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 C1orf131Q8NDD1 294 aaKnown RBP14.83□□□□□ -0.04
PTCH1-226ENST00000553011 CLEC4CQ8WTT0 213 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 ZFRQ96KR1 1074 aaKnown RBP14.83□□□□□ -0.04
PTCH1-226ENST00000553011 SLC4A5Q9BY07 1137 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 CYLDQ9NQC7 956 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 CNGB3Q9NQW8 809 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 WNT16Q9UBV4 365 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 ATG2BQ96BY7 2078 aa14.83□□□□□ -0.04
PTCH1-226ENST00000553011 FAM170AA1A519 330 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 YJEFN3A6XGL0 299 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 E7ENQ6 273 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 LEFTY2O00292 366 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 ARNTLO00327 626 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 SCAMP3O14828 347 aaKnown RBP14.82□□□□□ -0.04
PTCH1-226ENST00000553011 CHADO15335 359 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 GPR37L1O60883 481 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 TCF3P15923 654 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 STAT1P42224 750 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 PSEN1P49768 467 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 DAOAP59103 153 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 YWHAGP61981 247 aaKnown RBP eCLIP14.82□□□□□ -0.04
PTCH1-226ENST00000553011 PFKPQ01813 784 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 PDCLQ13371 301 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 MTF1Q14872 753 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 TMEM31Q5JXX7 168 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 C10orf120Q5SQS8 335 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 HFE2Q6ZVN8 426 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 CACNA2D4Q7Z3S7 1137 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 SIX5Q8N196 739 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 EPS8L1Q8TE68 723 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 SLC20A1Q8WUM9 679 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 DDX1Q92499 740 aaKnown RBP14.82□□□□□ -0.04
PTCH1-226ENST00000553011 IRF7Q92985 503 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 WBP2Q969T9 261 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 C1QTNF1Q9BXJ1 281 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 NACA2Q9H009 215 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 MIS12Q9H081 205 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 LHX5Q9H2C1 402 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 ARHGEF3Q9NR81 526 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 GKN1Q9NS71 199 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 CLIC5Q9NZA1 410 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 IFNKQ9P0W0 207 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 TJP2Q9UDY2 1190 aa14.82□□□□□ -0.04
PTCH1-226ENST00000553011 NOCTQ9UK39 431 aaKnown RBP14.82□□□□□ -0.04
PTCH1-226ENST00000553011 KMT2EQ8IZD2 1858 aa14.81□□□□□ -0.04
PTCH1-226ENST00000553011 E5RJQ4 531 aa14.81□□□□□ -0.04
PTCH1-226ENST00000553011 MMEP08473 750 aa14.81□□□□□ -0.04
PTCH1-226ENST00000553011 RALAP11233 206 aa14.81□□□□□ -0.04
PTCH1-226ENST00000553011 ATP5C1P36542 298 aaKnown RBP14.81□□□□□ -0.04
PTCH1-226ENST00000553011 PBX1P40424 430 aa14.81□□□□□ -0.04
PTCH1-226ENST00000553011 ARID5AQ03989 594 aa14.81□□□□□ -0.04
PTCH1-226ENST00000553011 TNK2Q07912 1038 aa14.81□□□□□ -0.04
PTCH1-226ENST00000553011 SLC44A4Q53GD3 710 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms