RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 SOWAHAQ2M3V2 549 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 TSR1Q2NL82 804 aaKnown RBP12.05□□□□□ -0.48
TMEM116-218ENST00000552839 ZNF394Q53GI3 561 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 KLHDC7AQ5VTJ3 777 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 PSAPL1Q6NUJ1 521 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 TMEM270Q6UE05 265 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 TTC9BQ8N6N2 239 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 ARID3AQ99856 593 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 MED10Q9BTT4 135 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 NUP58Q9BVL2 599 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 NT5C1AQ9BXI3 368 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 PDCL3Q9H2J4 239 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 FAM124BQ9H5Z6 455 aaPredicted RBP12.05□□□□□ -0.48
TMEM116-218ENST00000552839 NLRC4Q9NPP4 1024 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 PLCB1Q9NQ66 1216 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 CISHQ9NSE2 258 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 OBP2AQ9NY56 170 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 CDH9Q9ULB4 789 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 SLC27A5Q9Y2P5 690 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 PRAMEF12O95522 483 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 FAM163BP0C2L3 166 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 CCDC172P0C7W6 258 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 HOXB3P14651 431 aaPredicted RBP12.04□□□□□ -0.48
TMEM116-218ENST00000552839 UCHL3P15374 230 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 MPLP40238 635 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 ALDH1A3P47895 512 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 KLK7P49862 253 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 NDST1P52848 882 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 PSMC1P62191 440 aaKnown RBP12.04□□□□□ -0.48
TMEM116-218ENST00000552839 CYP27A1Q02318 531 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 PLD1Q13393 1074 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 SLC39A12Q504Y0 691 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 GPR158Q5T848 1215 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 TCEAL6Q6IPX3 200 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 GJB7Q6PEY0 223 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 C4orf50Q6ZRC1 276 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 TMC6Q7Z403 805 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 DNAJB7Q7Z6W7 309 aaPredicted RBP12.04□□□□□ -0.48
TMEM116-218ENST00000552839 UNC93AQ86WB7 457 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 SPATA2LQ8IUW3 424 aaPredicted RBP12.04□□□□□ -0.48
TMEM116-218ENST00000552839 RBBP8NLQ8NC74 664 aaPredicted RBP12.04□□□□□ -0.48
TMEM116-218ENST00000552839 BPIFB1Q8TDL5 484 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 TCEAL3Q969E4 200 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 ZC3H10Q96K80 434 aaKnown RBP12.04□□□□□ -0.48
TMEM116-218ENST00000552839 TMEM209Q96SK2 561 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 ATXN3LQ9H3M9 355 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 GRPEL1Q9HAV7 217 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 ZMIZ1Q9ULJ6 1067 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 PCDHGA5Q9Y5G8 931 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 FHOD1Q9Y613 1164 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 MYO16Q9Y6X6 1858 aa12.04□□□□□ -0.48
TMEM116-218ENST00000552839 MTMR11A4FU01 709 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 GIPC1O14908 333 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 CILPO75339 1184 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 SOAT2O75908 522 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 GABRR2P28476 465 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 STAT1P42224 750 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 PDE6CP51160 858 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 ZNF75DP51815 510 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 SLC8A3P57103 927 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 APBA1Q02410 837 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 GPR17Q13304 367 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 ORC1Q13415 861 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 NR1I3Q14994 352 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 NFE2Q16621 373 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-218ENST00000552839 ITPRIPL2Q3MIP1 535 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 TMEM196Q5HYL7 178 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 MDH1BQ5I0G3 518 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 INTS6LQ5JSJ4 861 aaKnown RBP12.03□□□□□ -0.48
TMEM116-218ENST00000552839 RNF43Q68DV7 783 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 SPECC1LQ69YQ0 1117 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 SCARA3Q6AZY7 606 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 FSTL4Q6MZW2 842 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 UNQ6494/PRO21346Q6UXR6 183 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 APTXQ7Z2E3 356 aaKnown RBP12.03□□□□□ -0.48
TMEM116-218ENST00000552839 OSTM1Q86WC4 334 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 ABCA7Q8IZY2 2146 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 ATAD1Q8NBU5 361 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 LMO3Q8TAP4 145 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 KBTBD7Q8WVZ9 684 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 PSMG2Q969U7 264 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 JAKMIP2Q96AA8 810 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 CHFRQ96EP1 664 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 HEXIM2Q96MH2 286 aaKnown RBP12.03□□□□□ -0.48
TMEM116-218ENST00000552839 ACBD6Q9BR61 282 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 VPS45Q9NRW7 570 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 POLR3BQ9NW08 1133 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-218ENST00000552839 ABI2Q9NYB9 513 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-218ENST00000552839 SLC8A2Q9UPR5 921 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 SIK3Q9Y2K2 1263 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 ASB3Q9Y575 518 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 OBSL1O75147 1896 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 THADAQ6YHU6 1953 aa12.03□□□□□ -0.48
TMEM116-218ENST00000552839 CHD6Q8TD26 2715 aa12.02□□□□□ -0.48
TMEM116-218ENST00000552839 KIAA1549LQ6ZVL6 1849 aa12.02□□□□□ -0.48
TMEM116-218ENST00000552839 MED7O43513 233 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 ANXA13P27216 316 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 WEE1P30291 646 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 NOVA1P51513 510 aaKnown RBP12.02□□□□□ -0.49
TMEM116-218ENST00000552839 BPIFB4P59827 614 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms