RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 MBL2P11226 248 aaPredicted RBP12.57□□□□□ -0.4
CKAP4-202ENST00000552828 ADH5P11766 374 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 TIE1P35590 1138 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 DHPSP49366 369 aaPredicted RBP12.57□□□□□ -0.4
CKAP4-202ENST00000552828 TUBP50607 506 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 MYL6P60660 151 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 TNNC1P63316 161 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 ZNF252P-AS1Q0IIN9 211 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 LMAN2Q12907 356 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 BYSLQ13895 437 aaKnown RBP12.57□□□□□ -0.4
CKAP4-202ENST00000552828 BMT2Q1RMZ1 405 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 EOGTQ5NDL2 527 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 EMC10Q5UCC4 262 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 PEAR1Q5VY43 1037 aaPredicted RBP12.57□□□□□ -0.4
CKAP4-202ENST00000552828 LPCAT2Q7L5N7 544 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 SYT12Q8IV01 421 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 ETFBKMTQ8IXQ9 262 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 C12orf56Q8IXR9 622 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 KDF1Q8NAX2 398 aaPredicted RBP12.57□□□□□ -0.4
CKAP4-202ENST00000552828 RDH13Q8NBN7 331 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 PIGKQ92643 395 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 CCDC127Q96BQ5 260 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 TIGD1Q96MW7 591 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 TMEM121BQ9BXQ6 578 aaPredicted RBP12.57□□□□□ -0.4
CKAP4-202ENST00000552828 POLMQ9NP87 494 aaPredicted RBP12.57□□□□□ -0.4
CKAP4-202ENST00000552828 ARHGEF4Q9NR80 690 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 EXOC1Q9NV70 894 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 COMMD8Q9NX08 183 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 CGNQ9P2M7 1197 aaKnown RBP12.57□□□□□ -0.4
CKAP4-202ENST00000552828 MBD1Q9UIS9 605 aaPredicted RBP12.57□□□□□ -0.4
CKAP4-202ENST00000552828 HOOK1Q9UJC3 728 aaKnown RBP12.57□□□□□ -0.4
CKAP4-202ENST00000552828 MYO16Q9Y6X6 1858 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 ABCA7Q8IZY2 2146 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 FAM208BQ5VWN6 2430 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 CLDN5O00501 218 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 SCAMP3O14828 347 aaKnown RBP12.56□□□□□ -0.4
CKAP4-202ENST00000552828 HOXC11O43248 304 aaPredicted RBP12.56□□□□□ -0.4
CKAP4-202ENST00000552828 RPN1P04843 607 aaKnown RBP12.56□□□□□ -0.4
CKAP4-202ENST00000552828 HOXD12P35452 270 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 DPP6P42658 865 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 PTGER3P43115 390 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 CYP2J2P51589 502 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 UBE2HP62256 183 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 CLDN10P78369 228 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 GAD2Q05329 585 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 DPYDQ12882 1025 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 KMT5BQ4FZB7 885 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 LY6G5CQ5SRR4 150 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 HECTD3Q5T447 861 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 SLC23A3Q6PIS1 610 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 UNQ6494/PRO21346Q6UXR6 183 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 CLEC17AQ6ZS10 378 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 PAQR9Q6ZVX9 377 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 FRMD1Q8N878 549 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 TMEM174Q8WUU8 243 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 RLN3Q8WXF3 142 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 SYAP1Q96A49 352 aaPredicted RBP12.56□□□□□ -0.4
CKAP4-202ENST00000552828 SPACA7Q96KW9 195 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 KCNK16Q96T55 309 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 SLC39A2Q9NP94 309 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 TMEM74BQ9NUR3 256 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 CHORDC1Q9UHD1 332 aaPredicted RBP12.56□□□□□ -0.4
CKAP4-202ENST00000552828 STARD13Q9Y3M8 1113 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 PTPRDP23468 1912 aa12.56□□□□□ -0.4
CKAP4-202ENST00000552828 HELZP42694 1942 aaKnown RBP12.56□□□□□ -0.4
CKAP4-202ENST00000552828 ZFYVE26Q68DK2 2539 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 UPK3BL1B0FP48 263 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 C1QTNF9BB2RNN3 333 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 UPK3BL2E5RIL1 263 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 CLIC2O15247 247 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 MAP3K13O43283 966 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 PRR29P0C7W0 189 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 C1QTNF9P0C862 333 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 TRPC3Q13507 836 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 PREPLQ4J6C6 727 aaPredicted RBP12.55□□□□□ -0.4
CKAP4-202ENST00000552828 TRIM61Q5EBN2 209 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 TRMT11Q7Z4G4 463 aaKnown RBP12.55□□□□□ -0.4
CKAP4-202ENST00000552828 TTC30AQ86WT1 665 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 TMEFF1Q8IYR6 380 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 SCAMP5Q8TAC9 235 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 HMGB4Q8WW32 186 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 FBXO32Q969P5 355 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 GBP4Q96PP9 640 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 DEC1Q9P2X7 70 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 NXF1Q9UBU9 619 aaKnown RBP12.55□□□□□ -0.4
CKAP4-202ENST00000552828 PILRBQ9UKJ0 227 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 HCN2Q9UL51 889 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 ATP8B3O60423 1300 aa12.55□□□□□ -0.4
CKAP4-202ENST00000552828 TCRBV21S2A2A0A5A6 115 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 TBC1D3BA6NDS4 549 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 TMEM8BA6NDV4 472 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 GREM1O60565 184 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 TULP3O75386 442 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 SMC2O95347 1197 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 AP3M2P53677 418 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 SLC5A3P53794 718 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 CDH8P55286 799 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 KDSRQ06136 332 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 FOXC1Q12948 553 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms