RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 ANO4Q32M45 955 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 ZNF667Q5HYK9 610 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 HECTD3Q5T447 861 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 NAIF1Q69YI7 327 aaPredicted RBP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 SCUBE3Q8IX30 993 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 NELFCDQ8IXH7 590 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 NUP93Q8N1F7 819 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 KIAA1958Q8N8K9 716 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 TXNDC5Q8NBS9 432 aaKnown RBP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 RIN3Q8TB24 985 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 GOLGA5Q8TBA6 731 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 KBTBD7Q8WVZ9 684 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 HMGB4Q8WW32 186 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 FAM84AQ96KN4 292 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 C8orf48Q96LL4 319 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 USP28Q96RU2 1077 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 PKMYT1Q99640 499 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 CGRRF1Q99675 332 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 MRPL45Q9BRJ2 306 aaKnown RBP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 MAGEF1Q9HAY2 307 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 CRTAC1Q9NQ79 661 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 RXFP3Q9NSD7 469 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 LMBRD1Q9NUN5 540 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 CGNQ9P2M7 1197 aaKnown RBP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 SCAMP3O14828 347 aaKnown RBP9.23□□□□□ -0.93
TMEM116-217ENST00000552801 TACC1O75410 805 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 CYP17A1P05093 508 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 FAM163BP0C2L3 166 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 PMLP29590 882 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 ATICP31939 592 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 EIF2DP41214 584 aaKnown RBP9.23□□□□□ -0.93
TMEM116-217ENST00000552801 GRIA2P42262 883 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 AP3M2P53677 418 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 USP46P62068 366 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 CYP24A1Q07973 514 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 CCDC173Q0VFZ6 552 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 PSMD6Q15008 389 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 CRY1Q16526 586 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 ZNF699Q32M78 642 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 TRIM61Q5EBN2 209 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 SH3PXD2AQ5TCZ1 1133 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 PMS2CLQ68D20 193 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 ARMCX6Q7L4S7 300 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 CEP57L1Q8IYX8 460 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 HDDC3Q8N4P3 179 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 ALLCQ8N6M5 410 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 B3GALNT2Q8NCR0 500 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 OVCA2Q8WZ82 227 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 HPS3Q969F9 1004 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 OTUB2Q96DC9 234 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 SMARCD1Q96GM5 515 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 FGFBP2Q9BYJ0 223 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 TRIM9Q9C026 710 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 AGPAT3Q9NRZ7 376 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 DEC1Q9P2X7 70 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 LSM7Q9UK45 103 aaKnown RBP9.23□□□□□ -0.93
TMEM116-217ENST00000552801 ZDHHC9Q9Y397 364 aa9.23□□□□□ -0.93
TMEM116-217ENST00000552801 KIAA1549LQ6ZVL6 1849 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 PTPRJQ12913 1337 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 TCRBV21S2A2A0A5A6 115 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 E2F8A0AVK6 867 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 LNP1A1A4G5 178 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 K7EQS6 105 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 AP5Z1O43299 807 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 CUTAO60888 179 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 PPP6R2O75170 966 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 CFIP05156 583 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 IRF1P10914 325 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 OPRD1P41143 372 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 TNFRSF4P43489 277 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 MAPK8P45983 427 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 ME1P48163 572 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 SHC2P98077 582 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 LYSMD4Q5XG99 296 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 SCARA5Q6ZMJ2 495 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 UNC13DQ70J99 1090 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 RABEPKQ7Z6M1 372 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 ADGRG2Q8IZP9 1017 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 ZNF513Q8N8E2 541 aaPredicted RBP9.22□□□□□ -0.93
TMEM116-217ENST00000552801 NAT16Q8N8M0 369 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 CCDC150Q8NCX0 1101 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 MDGA1Q8NFP4 955 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 SCFD1Q8WVM8 642 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 CCDC47Q96A33 483 aaKnown RBP9.22□□□□□ -0.93
TMEM116-217ENST00000552801 XPO6Q96QU8 1125 aaKnown RBP9.22□□□□□ -0.93
TMEM116-217ENST00000552801 TTLL2Q9BWV7 592 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 IMPG2Q9BZV3 1241 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 ZNF518BQ9C0D4 1074 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 FBXO44Q9H4M3 255 aa9.22□□□□□ -0.93
TMEM116-217ENST00000552801 DMAP1Q9NPF5 467 aaPredicted RBP9.22□□□□□ -0.93
TMEM116-217ENST00000552801 TFIP11Q9UBB9 837 aaKnown RBP9.22□□□□□ -0.93
TMEM116-217ENST00000552801 CHORDC1Q9UHD1 332 aaPredicted RBP9.22□□□□□ -0.93
TMEM116-217ENST00000552801 MORC2Q9Y6X9 1032 aaPredicted RBP9.22□□□□□ -0.93
TMEM116-217ENST00000552801 PTPRDP23468 1912 aa9.21□□□□□ -0.93
TMEM116-217ENST00000552801 TPRP12270 2363 aaKnown RBP9.21□□□□□ -0.94
TMEM116-217ENST00000552801 A0A087X0B3 334 aa9.21□□□□□ -0.94
TMEM116-217ENST00000552801 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.21□□□□□ -0.94
TMEM116-217ENST00000552801 CLDN5O00501 218 aa9.21□□□□□ -0.94
TMEM116-217ENST00000552801 POLR2DO15514 142 aaKnown RBP9.21□□□□□ -0.94
TMEM116-217ENST00000552801 NDUFS2O75306 463 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms