RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 RTN3O95197 1032 aaPredicted RBP17.34■□□□□ 0.37
RAB5C-209ENST00000552162 DLATP10515 647 aaKnown RBP17.34■□□□□ 0.37
RAB5C-209ENST00000552162 TNNC1P63316 161 aa17.34■□□□□ 0.37
RAB5C-209ENST00000552162 ANO4Q32M45 955 aa17.34■□□□□ 0.37
RAB5C-209ENST00000552162 WDR72Q3MJ13 1102 aa17.34■□□□□ 0.37
RAB5C-209ENST00000552162 STXBP4Q6ZWJ1 553 aa17.34■□□□□ 0.37
RAB5C-209ENST00000552162 BBS7Q8IWZ6 715 aa17.34■□□□□ 0.37
RAB5C-209ENST00000552162 CCDC65Q8IXS2 484 aa17.34■□□□□ 0.37
RAB5C-209ENST00000552162 CHCHD4Q8N4Q1 142 aa17.34■□□□□ 0.37
RAB5C-209ENST00000552162 B3GALNT2Q8NCR0 500 aa17.34■□□□□ 0.37
RAB5C-209ENST00000552162 GLIS3Q8NEA6 775 aa17.34■□□□□ 0.37
RAB5C-209ENST00000552162 OR2I1PQ8NGU4 316 aa17.34■□□□□ 0.37
RAB5C-209ENST00000552162 B3GNT5Q9BYG0 378 aa17.34■□□□□ 0.37
RAB5C-209ENST00000552162 A0A087X0B3 334 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 IGHV1OR15-9A0A0B4J2B8 117 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 FAM221BA6H8Z2 402 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 ARHGAP33O14559 1287 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 CST3P01034 146 aaPredicted RBP17.33■□□□□ 0.36
RAB5C-209ENST00000552162 TNNI1P19237 187 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 NTSR1P30989 418 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 WASP42768 502 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 ZNF423Q2M1K9 1284 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 HECTD3Q5T447 861 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 ERICH6BQ5W0A0 696 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 NUDT18Q6ZVK8 323 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 MIB1Q86YT6 1006 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 SLC41A1Q8IVJ1 513 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 HPS3Q969F9 1004 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 HSPA12BQ96MM6 686 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 PANK2Q9BZ23 570 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 CCSER2Q9H7U1 834 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 KIAA1586Q9HCI6 787 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 SPHK2Q9NRA0 654 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 HCN2Q9UL51 889 aa17.33■□□□□ 0.36
RAB5C-209ENST00000552162 A0A1W2PQF6 199 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 A8MXQ7 604 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 TAF4O00268 1085 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 TRIM24O15164 1050 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 ZNF217O75362 1048 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 FAM163BP0C2L3 166 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 IRF1P10914 325 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 CD59P13987 128 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 NDUFV2P19404 249 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 HOXD13P35453 343 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 TUBP50607 506 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 HNRNPDQ14103 355 aaKnown RBP17.32■□□□□ 0.36
RAB5C-209ENST00000552162 SNRNP35Q16560 246 aaKnown RBP17.32■□□□□ 0.36
RAB5C-209ENST00000552162 EGFLAMQ63HQ2 1017 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 RAB44Q7Z6P3 723 aaPredicted RBP17.32■□□□□ 0.36
RAB5C-209ENST00000552162 PROSER1Q86XN7 944 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 TMEM25Q86YD3 366 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 RDH13Q8NBN7 331 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 SCAMP5Q8TAC9 235 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 KCNK16Q96T55 309 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 CGRRF1Q99675 332 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 DUSP9Q99956 384 aaKnown RBP17.32■□□□□ 0.36
RAB5C-209ENST00000552162 DNAAF2Q9NVR5 837 aaKnown RBP17.32■□□□□ 0.36
RAB5C-209ENST00000552162 CHORDC1Q9UHD1 332 aaPredicted RBP17.32■□□□□ 0.36
RAB5C-209ENST00000552162 CYP8B1Q9UNU6 501 aa17.32■□□□□ 0.36
RAB5C-209ENST00000552162 LAMA5O15230 3695 aa17.31■□□□□ 0.36
RAB5C-209ENST00000552162 ATP8B3O60423 1300 aa17.31■□□□□ 0.36
RAB5C-209ENST00000552162 ZBTB24O43167 697 aaPredicted RBP17.31■□□□□ 0.36
RAB5C-209ENST00000552162 SYPP08247 313 aa17.31■□□□□ 0.36
RAB5C-209ENST00000552162 SLC5A3P53794 718 aa17.31■□□□□ 0.36
RAB5C-209ENST00000552162 CEBPZQ03701 1054 aaKnown RBP17.31■□□□□ 0.36
RAB5C-209ENST00000552162 SNX30Q5VWJ9 437 aa17.31■□□□□ 0.36
RAB5C-209ENST00000552162 GRAMD4Q6IC98 578 aa17.31■□□□□ 0.36
RAB5C-209ENST00000552162 FAM35AQ86V20 835 aa17.31■□□□□ 0.36
RAB5C-209ENST00000552162 TRIML1Q8N9V2 468 aa17.31■□□□□ 0.36
RAB5C-209ENST00000552162 WBP2Q969T9 261 aa17.31■□□□□ 0.36
RAB5C-209ENST00000552162 ERLEC1Q96DZ1 483 aa17.31■□□□□ 0.36
RAB5C-209ENST00000552162 ACOX2Q99424 681 aa17.31■□□□□ 0.36
RAB5C-209ENST00000552162 NACA2Q9H009 215 aa17.31■□□□□ 0.36
RAB5C-209ENST00000552162 DNAJC17Q9NVM6 304 aaKnown RBP17.31■□□□□ 0.36
RAB5C-209ENST00000552162 NXF1Q9UBU9 619 aaKnown RBP17.31■□□□□ 0.36
RAB5C-209ENST00000552162 STARD13Q9Y3M8 1113 aa17.31■□□□□ 0.36
RAB5C-209ENST00000552162 ADAMTS20P59510 1910 aa17.31■□□□□ 0.36
RAB5C-209ENST00000552162 A0A1W2PQD8 194 aa17.3■□□□□ 0.36
RAB5C-209ENST00000552162 MYL6P60660 151 aa17.3■□□□□ 0.36
RAB5C-209ENST00000552162 CYP24A1Q07973 514 aa17.3■□□□□ 0.36
RAB5C-209ENST00000552162 PSMD6Q15008 389 aa17.3■□□□□ 0.36
RAB5C-209ENST00000552162 TRIP6Q15654 476 aaKnown RBP17.3■□□□□ 0.36
RAB5C-209ENST00000552162 FAM173BQ6P4H8 233 aa17.3■□□□□ 0.36
RAB5C-209ENST00000552162 CHPFQ8IZ52 775 aa17.3■□□□□ 0.36
RAB5C-209ENST00000552162 PDILTQ8N807 584 aa17.3■□□□□ 0.36
RAB5C-209ENST00000552162 IPO4Q8TEX9 1081 aaKnown RBP17.3■□□□□ 0.36
RAB5C-209ENST00000552162 CCDC127Q96BQ5 260 aa17.3■□□□□ 0.36
RAB5C-209ENST00000552162 CAMK1GQ96NX5 476 aa17.3■□□□□ 0.36
RAB5C-209ENST00000552162 MED10Q9BTT4 135 aa17.3■□□□□ 0.36
RAB5C-209ENST00000552162 CD248Q9HCU0 757 aa17.3■□□□□ 0.36
RAB5C-209ENST00000552162 DMAP1Q9NPF5 467 aaPredicted RBP17.3■□□□□ 0.36
RAB5C-209ENST00000552162 GMIPQ9P107 970 aa17.3■□□□□ 0.36
RAB5C-209ENST00000552162 NEDD8-MDP1E9PL57 170 aa17.29■□□□□ 0.36
RAB5C-209ENST00000552162 EIF3DO15371 548 aaKnown RBP eCLIP17.29■□□□□ 0.36
RAB5C-209ENST00000552162 SH3BP5O60239 455 aa17.29■□□□□ 0.36
RAB5C-209ENST00000552162 GJB3O75712 270 aa17.29■□□□□ 0.36
RAB5C-209ENST00000552162 STAU1O95793 577 aaKnown RBP17.29■□□□□ 0.36
RAB5C-209ENST00000552162 CAPNS1P04632 268 aa17.29■□□□□ 0.36
RAB5C-209ENST00000552162 ZDHHC11BP0C7U3 371 aa17.29■□□□□ 0.36
RAB5C-209ENST00000552162 SLC14A1Q13336 389 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms