RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 VSTM1Q6UX27 236 aa13.55□□□□□ -0.24
CACNB3-221ENST00000552022 KIAA1324Q6UXG2 1013 aaKnown RBP13.55□□□□□ -0.24
CACNB3-221ENST00000552022 NUDT18Q6ZVK8 323 aa13.55□□□□□ -0.24
CACNB3-221ENST00000552022 GPR155Q7Z3F1 870 aa13.55□□□□□ -0.24
CACNB3-221ENST00000552022 METTL3Q86U44 580 aaKnown RBP13.55□□□□□ -0.24
CACNB3-221ENST00000552022 TMPRSS12Q86WS5 348 aa13.55□□□□□ -0.24
CACNB3-221ENST00000552022 DDX42Q86XP3 938 aaKnown RBP eCLIP13.55□□□□□ -0.24
CACNB3-221ENST00000552022 CADM4Q8NFZ8 388 aa13.55□□□□□ -0.24
CACNB3-221ENST00000552022 CXorf38Q8TB03 319 aa13.55□□□□□ -0.24
CACNB3-221ENST00000552022 OTUB2Q96DC9 234 aa13.55□□□□□ -0.24
CACNB3-221ENST00000552022 ZFRQ96KR1 1074 aaKnown RBP13.55□□□□□ -0.24
CACNB3-221ENST00000552022 CEP295NLQ96MC4 621 aa13.55□□□□□ -0.24
CACNB3-221ENST00000552022 CLMPQ9H6B4 373 aa13.55□□□□□ -0.24
CACNB3-221ENST00000552022 CRTAC1Q9NQ79 661 aa13.55□□□□□ -0.24
CACNB3-221ENST00000552022 SPHK2Q9NRA0 654 aa13.55□□□□□ -0.24
CACNB3-221ENST00000552022 GDAP2Q9NXN4 497 aa13.55□□□□□ -0.24
CACNB3-221ENST00000552022 AGO2Q9UKV8 859 aaKnown RBP13.55□□□□□ -0.24
CACNB3-221ENST00000552022 STYXL1Q9Y6J8 313 aa13.55□□□□□ -0.24
CACNB3-221ENST00000552022 A0A1B0GVT2 93 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 CAPN8A6NHC0 703 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 METTL12A8MUP2 240 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 KCNJ18B7U540 433 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 PYCARD-AS1I3L0S3 204 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 ITGB3P05106 788 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 SCP2P22307 547 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 LMO2P25791 158 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 PCSK1P29120 753 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 PSMC1P62191 440 aaKnown RBP13.54□□□□□ -0.24
CACNB3-221ENST00000552022 NOP14P78316 857 aaKnown RBP13.54□□□□□ -0.24
CACNB3-221ENST00000552022 GTF2BQ00403 316 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 POU5F1Q01860 360 aaKnown RBP13.54□□□□□ -0.24
CACNB3-221ENST00000552022 ST3GAL1Q11201 340 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 TAF10Q12962 218 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 SUZ12Q15022 739 aaKnown RBP13.54□□□□□ -0.24
CACNB3-221ENST00000552022 ANKRD1Q15327 319 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 SOWAHAQ2M3V2 549 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 C4orf50Q6ZRC1 276 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 NT5DC4Q86YG4 428 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 BBS7Q8IWZ6 715 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 ADGRF2Q8IZF7 708 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 MYCT1Q8N699 235 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 TOP6BLQ8N6T0 577 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 C1orf127Q8N9H9 656 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 WBP2Q969T9 261 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 MYLPFQ96A32 169 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 NXPE2Q96DL1 559 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 FAM84AQ96KN4 292 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 FIZ1Q96SL8 496 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 REEP2Q9BRK0 252 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 IKZF4Q9H2S9 585 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 ITM2CQ9NQX7 267 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 GMIPQ9P107 970 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 USP36Q9P275 1121 aaKnown RBP13.54□□□□□ -0.24
CACNB3-221ENST00000552022 EIF2B4Q9UI10 523 aaKnown RBP13.54□□□□□ -0.24
CACNB3-221ENST00000552022 PCDHB6Q9Y5E3 794 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 SNX9Q9Y5X1 595 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 SLCO1B1Q9Y6L6 691 aa13.54□□□□□ -0.24
CACNB3-221ENST00000552022 COL12A1Q99715 3063 aa13.53□□□□□ -0.24
CACNB3-221ENST00000552022 RRP8O43159 456 aaKnown RBP13.53□□□□□ -0.24
CACNB3-221ENST00000552022 TRAK2O60296 914 aa13.53□□□□□ -0.24
CACNB3-221ENST00000552022 PLCG1P19174 1290 aa13.53□□□□□ -0.24
CACNB3-221ENST00000552022 CSNK1EP49674 416 aaKnown RBP13.53□□□□□ -0.24
CACNB3-221ENST00000552022 ZNF131P52739 623 aa13.53□□□□□ -0.24
CACNB3-221ENST00000552022 CLDN6P56747 220 aa13.53□□□□□ -0.24
CACNB3-221ENST00000552022 GRAMD4Q6IC98 578 aa13.53□□□□□ -0.24
CACNB3-221ENST00000552022 SLFN12LQ6IEE8 588 aa13.53□□□□□ -0.24
CACNB3-221ENST00000552022 CENPQQ7L2Z9 268 aaPredicted RBP13.53□□□□□ -0.24
CACNB3-221ENST00000552022 SYT15Q9BQS2 421 aa13.53□□□□□ -0.24
CACNB3-221ENST00000552022 DNMT3LQ9UJW3 386 aa13.53□□□□□ -0.24
CACNB3-221ENST00000552022 ODF2LQ9ULJ1 636 aa13.53□□□□□ -0.24
CACNB3-221ENST00000552022 F8VP50 259 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 KCNK3O14649 394 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 TRIM66O15016 1216 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 COCHO43405 550 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 IL18RAPO95256 599 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 ANXA13P27216 316 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 ADSSP30520 456 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 PRPHP41219 470 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 TPMTP51580 245 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 TFAMQ00059 246 aaKnown RBP13.52□□□□□ -0.25
CACNB3-221ENST00000552022 CYP27A1Q02318 531 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 KIF19Q2TAC6 998 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 DTHD1Q6ZMT9 781 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 LIMS2Q7Z4I7 341 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 KCTD17Q8N5Z5 321 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 CSGALNACT2Q8N6G5 542 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 LRRC52Q8N7C0 313 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 ZSWIM2Q8NEG5 633 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 KBTBD7Q8WVZ9 684 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 C8orf76Q96K31 380 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 C8orf48Q96LL4 319 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 DUSP9Q99956 384 aaKnown RBP13.52□□□□□ -0.25
CACNB3-221ENST00000552022 MKRN2Q9H000 416 aaKnown RBP13.52□□□□□ -0.25
CACNB3-221ENST00000552022 TMEM30AQ9NV96 361 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 DNAJC17Q9NVM6 304 aaKnown RBP13.52□□□□□ -0.25
CACNB3-221ENST00000552022 EHD2Q9NZN4 543 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 CDH9Q9ULB4 789 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 NOL7Q9UMY1 257 aaKnown RBP13.52□□□□□ -0.25
CACNB3-221ENST00000552022 SNX11Q9Y5W9 270 aa13.52□□□□□ -0.25
CACNB3-221ENST00000552022 AK5Q9Y6K8 562 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms