RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 ETFBKMTQ8IXQ9 262 aa11.77□□□□□ -0.53
PFDN5-212ENST00000550880 PHTF2Q8N3S3 785 aa11.77□□□□□ -0.53
PFDN5-212ENST00000550880 PNPLA1Q8N8W4 532 aa11.77□□□□□ -0.53
PFDN5-212ENST00000550880 ZSWIM2Q8NEG5 633 aa11.77□□□□□ -0.53
PFDN5-212ENST00000550880 IPO4Q8TEX9 1081 aaKnown RBP11.77□□□□□ -0.53
PFDN5-212ENST00000550880 ZNF419Q96HQ0 510 aaPredicted RBP11.77□□□□□ -0.53
PFDN5-212ENST00000550880 CAMK1GQ96NX5 476 aa11.77□□□□□ -0.53
PFDN5-212ENST00000550880 CBWD1Q9BRT8 395 aa11.77□□□□□ -0.53
PFDN5-212ENST00000550880 KIAA1586Q9HCI6 787 aa11.77□□□□□ -0.53
PFDN5-212ENST00000550880 OLFML3Q9NRN5 406 aa11.77□□□□□ -0.53
PFDN5-212ENST00000550880 ANAPC1Q9H1A4 1944 aa11.77□□□□□ -0.53
PFDN5-212ENST00000550880 ATP8B3O60423 1300 aa11.77□□□□□ -0.53
PFDN5-212ENST00000550880 CACNA1EQ15878 2313 aa11.77□□□□□ -0.53
PFDN5-212ENST00000550880 DMXL2Q8TDJ6 3036 aa11.77□□□□□ -0.53
PFDN5-212ENST00000550880 PI4KAP42356 2102 aa11.77□□□□□ -0.53
PFDN5-212ENST00000550880 HELZP42694 1942 aaKnown RBP11.76□□□□□ -0.53
PFDN5-212ENST00000550880 DSPP15924 2871 aaKnown RBP11.76□□□□□ -0.53
PFDN5-212ENST00000550880 A0A1W2PQF6 199 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 COCHO43405 550 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 TACC1O75410 805 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 NDUFV2P19404 249 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 TUBP50607 506 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 GRIN1Q05586 938 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 GOLGA8FQ08AF8 430 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 GOLGA8DPQ0D2H9 430 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 SF3A1Q15459 793 aaKnown RBP11.76□□□□□ -0.53
PFDN5-212ENST00000550880 SCARA3Q6AZY7 606 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 BRAPQ7Z569 592 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 WDR49Q8IV35 697 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 BBS7Q8IWZ6 715 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 OR5B17Q8NGF7 314 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 SETD7Q8WTS6 366 aaKnown RBP11.76□□□□□ -0.53
PFDN5-212ENST00000550880 HNRNPLLQ8WVV9 542 aaKnown RBP11.76□□□□□ -0.53
PFDN5-212ENST00000550880 EPSTI1Q96J88 318 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 FAM84AQ96KN4 292 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 DUSP9Q99956 384 aaKnown RBP11.76□□□□□ -0.53
PFDN5-212ENST00000550880 MRPL45Q9BRJ2 306 aaKnown RBP11.76□□□□□ -0.53
PFDN5-212ENST00000550880 DNAJC17Q9NVM6 304 aaKnown RBP11.76□□□□□ -0.53
PFDN5-212ENST00000550880 WDR35Q9P2L0 1181 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 CHORDC1Q9UHD1 332 aaPredicted RBP11.76□□□□□ -0.53
PFDN5-212ENST00000550880 PTPRDP23468 1912 aa11.76□□□□□ -0.53
PFDN5-212ENST00000550880 TNRC6BQ9UPQ9 1833 aaKnown RBP11.75□□□□□ -0.53
PFDN5-212ENST00000550880 A0A1B0GTW7 788 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 MEI4A8MW99 385 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 A8MXQ7 604 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 GFRA2O00451 464 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 GJB3O75712 270 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 CER1O95813 267 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 IRF1P10914 325 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 TNNI1P19237 187 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 GRIK2Q13002 908 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 STARD3Q14849 445 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 WDR72Q3MJ13 1102 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 EGFLAMQ63HQ2 1017 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 LARP1BQ659C4 914 aaKnown RBP11.75□□□□□ -0.53
PFDN5-212ENST00000550880 IL27RAQ6UWB1 636 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 KIAA1324Q6UXG2 1013 aaKnown RBP11.75□□□□□ -0.53
PFDN5-212ENST00000550880 TOGARAM2Q6ZUX3 1019 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 TRAPPC11Q7Z392 1133 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 GLRX5Q86SX6 157 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 TMEM25Q86YD3 366 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 KIF2CQ99661 725 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 MED10Q9BTT4 135 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 ZNF518BQ9C0D4 1074 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 SCUBE2Q9NQ36 999 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.75□□□□□ -0.539e-15■■■■■ 186.3
PFDN5-212ENST00000550880 PANK4Q9NVE7 773 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 COMMD8Q9NX08 183 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 KIAA1522Q9P206 1035 aaPredicted RBP11.75□□□□□ -0.53
PFDN5-212ENST00000550880 LSM7Q9UK45 103 aaKnown RBP11.75□□□□□ -0.53
PFDN5-212ENST00000550880 SMC3Q9UQE7 1217 aa11.75□□□□□ -0.53
PFDN5-212ENST00000550880 ADAMTS20P59510 1910 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 PLXND1Q9Y4D7 1925 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 NEDD8-MDP1E9PL57 170 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 CLSTN1O94985 981 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 DLATP10515 647 aaKnown RBP11.74□□□□□ -0.53
PFDN5-212ENST00000550880 CD6P30203 668 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 CASP5P51878 434 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 TRPC3Q13507 836 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 E2F5Q15329 346 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 SNX30Q5VWJ9 437 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 CCDC73Q6ZRK6 1079 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 CCDC65Q8IXS2 484 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 B3GALNT2Q8NCR0 500 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 MDM1Q8TC05 714 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 DNAJC19Q96DA6 116 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 LRIG1Q96JA1 1093 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 ZFRQ96KR1 1074 aaKnown RBP11.74□□□□□ -0.53
PFDN5-212ENST00000550880 MRGPRX1Q96LB2 322 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 CDC6Q99741 560 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 GABRG3Q99928 467 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 BBS2Q9BXC9 721 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 B3GNT5Q9BYG0 378 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 MIR1-1HGQ9H1L0 117 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 CCSER2Q9H7U1 834 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 PCOLCE2Q9UKZ9 415 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 RAXQ9Y2V3 346 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 NFE2L3Q9Y4A8 694 aa11.74□□□□□ -0.53
PFDN5-212ENST00000550880 CLDN5O00501 218 aa11.73□□□□□ -0.53
PFDN5-212ENST00000550880 CACNG3O60359 315 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms