RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 SH3BP1Q9Y3L3 701 aa22.99■■□□□ 1.27
SMARCC2-210ENST00000550519 PATE3B3GLJ2 98 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 HOXC11O43248 304 aaPredicted RBP22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 ADAM23O75077 832 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 AP1G2O75843 785 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 SLFN14P0C7P3 912 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 DLG4P78352 724 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 KDSRQ06136 332 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 SGSM1Q2NKQ1 1148 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 DAB2IPQ5VWQ8 1189 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 PSAPL1Q6NUJ1 521 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 BBS7Q8IWZ6 715 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 CEP57L1Q8IYX8 460 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 CRYBG2Q8N1P7 616 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 WHAMMQ8TF30 809 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 RLN3Q8WXF3 142 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 WBP2Q969T9 261 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 SMOQ99835 787 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 KCTD10Q9H3F6 313 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 CSNK1G1Q9HCP0 422 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 KRT82Q9NSB4 513 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 GMIPQ9P107 970 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 SERTAD1Q9UHV2 236 aa22.98■■□□□ 1.27
SMARCC2-210ENST00000550519 CDX4O14627 284 aaPredicted RBP22.97■■□□□ 1.27
SMARCC2-210ENST00000550519 BEST1O76090 585 aa22.97■■□□□ 1.27
SMARCC2-210ENST00000550519 RPN1P04843 607 aaKnown RBP22.97■■□□□ 1.27
SMARCC2-210ENST00000550519 DHPSP49366 369 aaPredicted RBP22.97■■□□□ 1.27
SMARCC2-210ENST00000550519 ZACNQ401N2 412 aa22.97■■□□□ 1.27
SMARCC2-210ENST00000550519 KCNV2Q8TDN2 545 aa22.97■■□□□ 1.27
SMARCC2-210ENST00000550519 PAGE5Q96GU1 130 aa22.97■■□□□ 1.27
SMARCC2-210ENST00000550519 ZDHHC4Q9NPG8 344 aa22.97■■□□□ 1.27
SMARCC2-210ENST00000550519 SPHK2Q9NRA0 654 aa22.97■■□□□ 1.27
SMARCC2-210ENST00000550519 MYOFQ9NZM1 2061 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 ACTN4O43707 911 aaKnown RBP22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 TULP3O75386 442 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 CLSTN1O94985 981 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 P4HA1P13674 534 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 CCDC130P13994 396 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 PGFP49763 221 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 NOVA1P51513 510 aaKnown RBP22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 IRX4P78413 519 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 MAP7D1Q3KQU3 841 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 BTBD8Q5XKL5 378 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 LPCAT2Q7L5N7 544 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 UNC93AQ86WB7 457 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 TMEM25Q86YD3 366 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 NAT16Q8N8M0 369 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 SLC2A14Q8TDB8 520 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 TMC2Q8TDI7 906 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 PIGKQ92643 395 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 SPACA7Q96KW9 195 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 TMEM9BQ9NQ34 198 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 EXOC1Q9NV70 894 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 DEC1Q9P2X7 70 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 HMGXB4Q9UGU5 601 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 RCOR1Q9UKL0 485 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 CFAP45Q9UL16 551 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 NUP205Q92621 2012 aa22.96■■□□□ 1.27
SMARCC2-210ENST00000550519 TBC1D3BA6NDS4 549 aa22.95■■□□□ 1.26
SMARCC2-210ENST00000550519 PDXKO00764 312 aa22.95■■□□□ 1.26
SMARCC2-210ENST00000550519 GREM1O60565 184 aa22.95■■□□□ 1.26
SMARCC2-210ENST00000550519 NDST1P52848 882 aa22.95■■□□□ 1.26
SMARCC2-210ENST00000550519 KMT5BQ4FZB7 885 aa22.95■■□□□ 1.26
SMARCC2-210ENST00000550519 PREPLQ4J6C6 727 aaPredicted RBP22.95■■□□□ 1.26
SMARCC2-210ENST00000550519 THADAQ6YHU6 1953 aa22.95■■□□□ 1.26
SMARCC2-210ENST00000550519 SV2AQ7L0J3 742 aa22.95■■□□□ 1.26
SMARCC2-210ENST00000550519 FRMD1Q8N878 549 aa22.95■■□□□ 1.26
SMARCC2-210ENST00000550519 TAF4BQ92750 862 aa22.95■■□□□ 1.26
SMARCC2-210ENST00000550519 FBXO44Q9H4M3 255 aa22.95■■□□□ 1.26
SMARCC2-210ENST00000550519 BCCIPQ9P287 314 aaKnown RBP eCLIP22.95■■□□□ 1.26
SMARCC2-210ENST00000550519 EVLQ9UI08 416 aaPredicted RBP22.95■■□□□ 1.26
SMARCC2-210ENST00000550519 MBD1Q9UIS9 605 aaPredicted RBP22.95■■□□□ 1.26
SMARCC2-210ENST00000550519 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 GIPC1O14908 333 aa22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 IKBKBO14920 756 aa22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 TLR5O60602 858 aa22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 ASS1P00966 412 aaKnown RBP22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 NR3C1P04150 777 aa22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 MAP3K7CLP57077 242 aa22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 ORC1Q13415 861 aa22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 SPDYCQ5MJ68 293 aa22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 HTR3DQ70Z44 454 aa22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 TMEFF1Q8IYR6 380 aa22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 C12orf29Q8N999 325 aa22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 TERB1Q8NA31 727 aa22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 HMGB4Q8WW32 186 aa22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 TLR8Q9NR97 1041 aaKnown RBP22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 HCN2Q9UL51 889 aa22.94■■□□□ 1.26
SMARCC2-210ENST00000550519 TCRBV21S2A2A0A5A6 115 aa22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 MAP3K13O43283 966 aa22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 IRF1P10914 325 aa22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 CSRP1P21291 193 aaKnown RBP22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 PTGER3P43115 390 aa22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 ASPAP45381 313 aa22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 DNM1Q05193 864 aaKnown RBP22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 PKP1Q13835 747 aa22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 BYSLQ13895 437 aaKnown RBP22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 ANO4Q32M45 955 aa22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 C1orf220Q5T0J3 134 aa22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 SH3PXD2AQ5TCZ1 1133 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms