RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 DUSP16Q9BY84 665 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 MMRN2Q9H8L6 949 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 GMIPQ9P107 970 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 ARMCX3Q9UH62 379 aaPredicted RBP21.06■□□□□ 0.96
GCN1-207ENST00000550471 LSM7Q9UK45 103 aaKnown RBP21.06■□□□□ 0.96
GCN1-207ENST00000550471 COQ4Q9Y3A0 265 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 ZNF292O60281 2723 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 A0A0A0MRY4 1105 aa21.05■□□□□ 0.96
GCN1-207ENST00000550471 RPP40O75818 363 aaKnown RBP21.05■□□□□ 0.96
GCN1-207ENST00000550471 APODP05090 189 aa21.05■□□□□ 0.96
GCN1-207ENST00000550471 ADH5P11766 374 aa21.05■□□□□ 0.96
GCN1-207ENST00000550471 ADORA2BP29275 332 aa21.05■□□□□ 0.96
GCN1-207ENST00000550471 OPRD1P41143 372 aa21.05■□□□□ 0.96
GCN1-207ENST00000550471 CETN1Q12798 172 aa21.05■□□□□ 0.96
GCN1-207ENST00000550471 TCERG1LQ5VWI1 586 aa21.05■□□□□ 0.96
GCN1-207ENST00000550471 HEATR6Q6AI08 1181 aaKnown RBP21.05■□□□□ 0.96
GCN1-207ENST00000550471 SMYD4Q8IYR2 804 aaPredicted RBP21.05■□□□□ 0.96
GCN1-207ENST00000550471 FBRSL1Q9HCM7 1045 aaKnown RBP21.05■□□□□ 0.96
GCN1-207ENST00000550471 DLL3Q9NYJ7 618 aa21.05■□□□□ 0.96
GCN1-207ENST00000550471 HMGXB4Q9UGU5 601 aa21.05■□□□□ 0.96
GCN1-207ENST00000550471 CIZ1Q9ULV3 898 aaPredicted RBP21.05■□□□□ 0.96
GCN1-207ENST00000550471 USP18Q9UMW8 372 aa21.05■□□□□ 0.96
GCN1-207ENST00000550471 BICDL2A1A5D9 508 aa21.04■□□□□ 0.96
GCN1-207ENST00000550471 AXIN1O15169 862 aa21.04■□□□□ 0.96
GCN1-207ENST00000550471 PMM2O15305 246 aa21.04■□□□□ 0.96
GCN1-207ENST00000550471 RALAP11233 206 aa21.04■□□□□ 0.96
GCN1-207ENST00000550471 CD58P19256 250 aa21.04■□□□□ 0.96
GCN1-207ENST00000550471 TBXAS1P24557 533 aaPredicted RBP21.04■□□□□ 0.96
GCN1-207ENST00000550471 GRIA2P42262 883 aa21.04■□□□□ 0.96
GCN1-207ENST00000550471 TNFRSF4P43489 277 aa21.04■□□□□ 0.96
GCN1-207ENST00000550471 DMC1Q14565 340 aa21.04■□□□□ 0.96
GCN1-207ENST00000550471 HTR3DQ70Z44 454 aa21.04■□□□□ 0.96
GCN1-207ENST00000550471 CCDC186Q7Z3E2 898 aa21.04■□□□□ 0.96
GCN1-207ENST00000550471 TMEM176AQ96HP8 235 aa21.04■□□□□ 0.96
GCN1-207ENST00000550471 HEXIM2Q96MH2 286 aaKnown RBP21.04■□□□□ 0.96
GCN1-207ENST00000550471 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.04■□□□□ 0.96
GCN1-207ENST00000550471 CISHQ9NSE2 258 aa21.04■□□□□ 0.96
GCN1-207ENST00000550471 CLIC5Q9NZA1 410 aa21.04■□□□□ 0.96
GCN1-207ENST00000550471 KIAA1257Q9ULG3 409 aa21.04■□□□□ 0.96
GCN1-207ENST00000550471 ZNF510Q9Y2H8 683 aa21.04■□□□□ 0.96
GCN1-207ENST00000550471 SPTBN4Q9H254 2564 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 VPS13AQ96RL7 3174 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 HOXC11O43248 304 aaPredicted RBP21.03■□□□□ 0.96
GCN1-207ENST00000550471 BEST1O76090 585 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 CCDC192P0DO97 292 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 ACO1P21399 889 aaKnown RBP21.03■□□□□ 0.96
GCN1-207ENST00000550471 PLA2G4AP47712 749 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 KIF11P52732 1056 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 CSRP2Q16527 193 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 DCAF17Q5H9S7 520 aaPredicted RBP21.03■□□□□ 0.96
GCN1-207ENST00000550471 ARHGAP17Q68EM7 881 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 ANKRD40Q6AI12 368 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 RHBDF2Q6PJF5 856 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 TRMT11Q7Z4G4 463 aaKnown RBP21.03■□□□□ 0.96
GCN1-207ENST00000550471 USP33Q8TEY7 942 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 WHAMMQ8TF30 809 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 ZC3H10Q96K80 434 aaKnown RBP21.03■□□□□ 0.96
GCN1-207ENST00000550471 ZFRQ96KR1 1074 aaKnown RBP21.03■□□□□ 0.96
GCN1-207ENST00000550471 TWNKQ96RR1 684 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 CCSER2Q9H7U1 834 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 DNMT3LQ9UJW3 386 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 PCDHGA5Q9Y5G8 931 aa21.03■□□□□ 0.96
GCN1-207ENST00000550471 DMDP11532 3685 aa21.02■□□□□ 0.96
GCN1-207ENST00000550471 P4HA2O15460 535 aa21.02■□□□□ 0.96
GCN1-207ENST00000550471 ALDH1A2O94788 518 aa21.02■□□□□ 0.96
GCN1-207ENST00000550471 DGKEP52429 567 aa21.02■□□□□ 0.96
GCN1-207ENST00000550471 DMWDQ09019 674 aa21.02■□□□□ 0.96
GCN1-207ENST00000550471 ORC1Q13415 861 aa21.02■□□□□ 0.96
GCN1-207ENST00000550471 DGLUCYQ7Z3D6 616 aa21.02■□□□□ 0.96
GCN1-207ENST00000550471 TSTD1Q8NFU3 115 aa21.02■□□□□ 0.96
GCN1-207ENST00000550471 RMDN1Q96DB5 314 aa21.02■□□□□ 0.96
GCN1-207ENST00000550471 WDR35Q9P2L0 1181 aa21.02■□□□□ 0.96
GCN1-207ENST00000550471 CDV3Q9UKY7 258 aaKnown RBP21.02■□□□□ 0.96
GCN1-207ENST00000550471 MMP17Q9ULZ9 603 aa21.02■□□□□ 0.96
GCN1-207ENST00000550471 USP3Q9Y6I4 520 aa21.02■□□□□ 0.96
GCN1-207ENST00000550471 CFAP54Q96N23 3096 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 HHLA1C9JL84 531 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 RHOBTB1O94844 696 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 KAT7O95251 611 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 GNA14O95837 355 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 E2F5Q15329 346 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 ELF2Q15723 593 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 EOGTQ5NDL2 527 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 PPP1R26Q5T8A7 1209 aaPredicted RBP21.01■□□□□ 0.95
GCN1-207ENST00000550471 PKN3Q6P5Z2 889 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 ANKRD52Q8NB46 1076 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 SEMA4DQ92854 862 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 ELMO3Q96BJ8 720 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 XPO6Q96QU8 1125 aaKnown RBP21.01■□□□□ 0.95
GCN1-207ENST00000550471 RTKNQ9BST9 563 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 KLF16Q9BXK1 252 aaPredicted RBP21.01■□□□□ 0.95
GCN1-207ENST00000550471 ARHGEF4Q9NR80 690 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 SPHK2Q9NRA0 654 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 C2orf42Q9NWW7 574 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 DEC1Q9P2X7 70 aa21.01■□□□□ 0.95
GCN1-207ENST00000550471 K7EQS6 105 aa21■□□□□ 0.95
GCN1-207ENST00000550471 FGFR1OPO95684 399 aaKnown RBP21■□□□□ 0.95
GCN1-207ENST00000550471 COG7P83436 770 aa21■□□□□ 0.95
GCN1-207ENST00000550471 CUL2Q13617 745 aa21■□□□□ 0.95
GCN1-207ENST00000550471 GAB4Q2WGN9 574 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms