RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 RECQL4O94761 1208 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 ZFPL1O95159 310 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 ELANEP08246 267 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 PPIFP30405 207 aaKnown RBP6.48□□□□□ -1.37
HCFC2-204ENST00000550335 MAGEA10P43363 369 aaPredicted RBP6.48□□□□□ -1.37
HCFC2-204ENST00000550335 SCNN1GP51170 649 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 NR1H2P55055 460 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 CHRNDQ07001 517 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 SF3A3Q12874 501 aaKnown RBP eCLIP6.48□□□□□ -1.37
HCFC2-204ENST00000550335 EIF2B5Q13144 721 aaKnown RBP6.48□□□□□ -1.37
HCFC2-204ENST00000550335 PDE1CQ14123 709 aaPredicted RBP6.48□□□□□ -1.37
HCFC2-204ENST00000550335 TOMM20Q15388 145 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 GALNTL6Q49A17 601 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 ANKRD40Q6AI12 368 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 SLC9A4Q6AI14 798 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 GLB1LQ6UWU2 654 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 SPOCD1Q6ZMY3 1216 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 MICALCLQ6ZW33 695 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 KRT27Q7Z3Y8 459 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 GDF7Q7Z4P5 450 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 CIR1Q86X95 450 aaPredicted RBP6.48□□□□□ -1.37
HCFC2-204ENST00000550335 IZUMO1Q8IYV9 350 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 TMEM132CQ8N3T6 1108 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 PDILTQ8N807 584 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 CCDC89Q8N998 374 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 Q8NA96 180 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 FEZF2Q8TBJ5 459 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 FAM136AQ96C01 138 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 SDCCAG3Q96C92 435 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 BARD1Q99728 777 aaKnown RBP6.48□□□□□ -1.37
HCFC2-204ENST00000550335 ACTRT3Q9BYD9 372 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 RMI1Q9H9A7 625 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 JMJD4Q9H9V9 463 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 PREBQ9HCU5 417 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 BLOC1S4Q9NUP1 217 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 AASSQ9UDR5 926 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 TMEM98Q9Y2Y6 226 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 SLC30A1Q9Y6M5 507 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 FPGT-TNNI3KV9GXZ4 949 aa6.48□□□□□ -1.37
HCFC2-204ENST00000550335 FAM90A18PA6NE21 464 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 FAM90A16PA6NEW6 464 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 FAM90A9PA6NNJ1 464 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 FAM90A5PA8MXJ8 464 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 DIRC3C9JPN6 131 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 HNRNPA1P09651 372 aaKnown RBP eCLIP6.47□□□□□ -1.37
HCFC2-204ENST00000550335 FAM90A15PP0C7V4 464 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 FAM90A14PP0C7W9 464 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 PEPDP12955 493 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 CAPN3P20807 821 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 GATA3P23771 443 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 PBX1P40424 430 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 RXRGP48443 463 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 CCR5P51681 352 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 EIF5P55010 431 aaKnown RBP6.47□□□□□ -1.37
HCFC2-204ENST00000550335 CXADRP78310 365 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 FHL3Q13643 280 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 EFR3AQ14156 821 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 HLXQ14774 488 aaPredicted RBP6.47□□□□□ -1.37
HCFC2-204ENST00000550335 ANKRD1Q15327 319 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 TMEM196Q5HYL7 178 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 TTC22Q5TAA0 569 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 OGFOD2Q6N063 350 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 CFAP161Q6P656 301 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 MAMDC4Q6UXC1 1216 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 P3H2Q8IVL5 708 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 SUN3Q8TAQ9 357 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 ATG4AQ8WYN0 398 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 ZUFSPQ96AP4 578 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 TWNKQ96RR1 684 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 TTPALQ9BTX7 342 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 ALOXE3Q9BYJ1 711 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 AMBRA1Q9C0C7 1298 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 PAIP1Q9H074 479 aaKnown RBP6.47□□□□□ -1.37
HCFC2-204ENST00000550335 ALG13Q9NP73 1137 aaKnown RBP6.47□□□□□ -1.37
HCFC2-204ENST00000550335 OLA1Q9NTK5 396 aaKnown RBP6.47□□□□□ -1.37
HCFC2-204ENST00000550335 LIN7CQ9NUP9 197 aaKnown RBP6.47□□□□□ -1.37
HCFC2-204ENST00000550335 VPS51Q9UID3 782 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 RNF114Q9Y508 228 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 XDHP47989 1333 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 SPATA31A3Q5VYP0 1347 aa6.47□□□□□ -1.37
HCFC2-204ENST00000550335 TRGV11A0A075B6L2 103 aa6.46□□□□□ -1.38
HCFC2-204ENST00000550335 A0A1W2PS29 197 aa6.46□□□□□ -1.38
HCFC2-204ENST00000550335 B4E171 279 aa6.46□□□□□ -1.38
HCFC2-204ENST00000550335 CYP27B1O15528 508 aa6.46□□□□□ -1.38
HCFC2-204ENST00000550335 ERBB2P04626 1255 aa6.46□□□□□ -1.38
HCFC2-204ENST00000550335 BMP7P18075 431 aa6.46□□□□□ -1.38
HCFC2-204ENST00000550335 ACO1P21399 889 aaKnown RBP6.46□□□□□ -1.38
HCFC2-204ENST00000550335 TSPAN7P41732 249 aa6.46□□□□□ -1.38
HCFC2-204ENST00000550335 RESTQ13127 1097 aa6.46□□□□□ -1.38
HCFC2-204ENST00000550335 LRRC24Q50LG9 513 aa6.46□□□□□ -1.38
HCFC2-204ENST00000550335 ATG16L1Q676U5 607 aa6.46□□□□□ -1.38
HCFC2-204ENST00000550335 B3GNTL1Q67FW5 361 aaPredicted RBP6.46□□□□□ -1.38
HCFC2-204ENST00000550335 ITPRIPL1Q6GPH6 555 aa6.46□□□□□ -1.38
HCFC2-204ENST00000550335 SLC22A17Q8WUG5 538 aa6.46□□□□□ -1.38
HCFC2-204ENST00000550335 ST8SIA4Q92187 359 aa6.46□□□□□ -1.38
HCFC2-204ENST00000550335 ZDHHC12Q96GR4 267 aa6.46□□□□□ -1.38
HCFC2-204ENST00000550335 RBM17Q96I25 401 aaKnown RBP6.46□□□□□ -1.38
HCFC2-204ENST00000550335 REXO5Q96IC2 774 aaKnown RBP6.46□□□□□ -1.38
HCFC2-204ENST00000550335 REEP2Q9BRK0 252 aa6.46□□□□□ -1.38
HCFC2-204ENST00000550335 PLEKHA5Q9HAU0 1116 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms