RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 FBXO32Q969P5 355 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 CEP295NLQ96MC4 621 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 B3GNT5Q9BYG0 378 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 XYLT2Q9H1B5 865 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 CFAP97Q9P2B7 532 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 KIAA1549LQ6ZVL6 1849 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 LRRC10BA6NIK2 292 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 APBB3O95704 486 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 STAU1O95793 577 aaKnown RBP14.21□□□□□ -0.13
NUP188-211ENST00000550219 CYP17A1P05093 508 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 TCF3P15923 654 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 EEF1GP26641 437 aaKnown RBP14.21□□□□□ -0.13
NUP188-211ENST00000550219 CLDN10P78369 228 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 ORC1Q13415 861 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 NCOA4Q13772 614 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 TCP11X2Q5H9J9 407 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 INTS8Q75QN2 995 aaKnown RBP14.21□□□□□ -0.13
NUP188-211ENST00000550219 TTC30AQ86WT1 665 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 FAM114A1Q8IWE2 563 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 TRIM59Q8IWR1 403 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 RNF214Q8ND24 703 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 PARD3BQ8TEW8 1205 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 CNOT6LQ96LI5 555 aaKnown RBP14.21□□□□□ -0.13
NUP188-211ENST00000550219 RNF38Q9H0F5 515 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 SDCBP2Q9H190 292 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 SMOC1Q9H4F8 434 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.21□□□□□ -0.133e-9■■■■■ 65.2
NUP188-211ENST00000550219 KRT82Q9NSB4 513 aa14.21□□□□□ -0.13
NUP188-211ENST00000550219 ARMCX3Q9UH62 379 aaPredicted RBP14.21□□□□□ -0.13
NUP188-211ENST00000550219 MYO16Q9Y6X6 1858 aa14.21□□□□□ -0.14
NUP188-211ENST00000550219 CCDC163A0A0D9SF12 145 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 KCNJ18B7U540 433 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 GOLGA6L19H0YKK7 550 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 SLC30A4O14863 429 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 EPN2O95208 641 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 OAS1P00973 400 aaKnown RBP14.2□□□□□ -0.14
NUP188-211ENST00000550219 PFKLP17858 780 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 YWHAQP27348 245 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 OPRD1P41143 372 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 DGKEP52429 567 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 DLG4P78352 724 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 SLC7A9P82251 487 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 KDSRQ06136 332 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 KCNJ12Q14500 433 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 C2orf27AQ580R0 203 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 C1orf220Q5T0J3 134 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 SYT13Q7L8C5 426 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 APTXQ7Z2E3 356 aaKnown RBP14.2□□□□□ -0.14
NUP188-211ENST00000550219 NUP93Q8N1F7 819 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 CAMKK1Q8N5S9 505 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 TSTD1Q8NFU3 115 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 KCNK16Q96T55 309 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 TPSD1Q9BZJ3 242 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 DMAP1Q9NPF5 467 aaPredicted RBP14.2□□□□□ -0.14
NUP188-211ENST00000550219 LIMA1Q9UHB6 759 aaKnown RBP14.2□□□□□ -0.14
NUP188-211ENST00000550219 INVSQ9Y283 1065 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 CACNA1AO00555 2505 aa14.2□□□□□ -0.14
NUP188-211ENST00000550219 CEP250Q9BV73 2442 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 ANTXRLA6NF34 631 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 DCLK1O15075 740 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 AP1G2O75843 785 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 RTN3O95197 1032 aaPredicted RBP14.19□□□□□ -0.14
NUP188-211ENST00000550219 VNN1O95497 513 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 OLFM2O95897 454 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 IRF1P10914 325 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 ATP1A3P13637 1013 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 KRT13P13646 458 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 CCDC130P13994 396 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 GBP1P32455 592 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 MPLP40238 635 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 PIK3CAP42336 1068 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 PPP3CCP48454 512 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 VAMP7P51809 220 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 AP3M2P53677 418 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 SLC5A3P53794 718 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 TPM4P67936 248 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 CCDC40Q4G0X9 1142 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 PPM1JQ5JR12 505 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 ANO7Q6IWH7 933 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 ACOT1Q86TX2 421 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 CCDC33Q8N5R6 958 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 PDZD8Q8NEN9 1154 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 SLC35C1Q96A29 364 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 JAKMIP2Q96AA8 810 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 SMARCD1Q96GM5 515 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 TNIP3Q96KP6 325 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 FAM49BQ9NUQ9 324 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 HMGXB4Q9UGU5 601 aa14.19□□□□□ -0.14
NUP188-211ENST00000550219 SLC9A3R1O14745 358 aaPredicted RBP14.18□□□□□ -0.14
NUP188-211ENST00000550219 COCHO43405 550 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 C4BPAP04003 597 aaKnown RBP14.18□□□□□ -0.14
NUP188-211ENST00000550219 FAM163BP0C2L3 166 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 P4HA1P13674 534 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 KRT31Q15323 416 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 DHCR24Q15392 516 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 ELF2Q15723 593 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 GAB4Q2WGN9 574 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 HSP90AA4PQ58FG1 418 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 IL31Q6EBC2 164 aa14.18□□□□□ -0.14
NUP188-211ENST00000550219 SPOPLQ6IQ16 392 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms