RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 NR1H3Q13133 447 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 MAN2A1Q16706 1144 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 TRIM65Q6PJ69 517 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 GBP6Q6ZN66 633 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 PIGZQ86VD9 579 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 EXOC4Q96A65 974 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 KREMEN1Q96MU8 473 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 CRACR2AQ9BSW2 395 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 UBXN6Q9BZV1 441 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 LMAN1LQ9HAT1 526 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 NAGPAQ9UK23 515 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 USP3Q9Y6I4 520 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 ATG2BQ96BY7 2078 aa18.14■□□□□ 0.5
CHMP1A-208ENST00000550102 A0A1W2PQH9 124 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 E2F8A0AVK6 867 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 GJA4P35212 333 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 NBL1P41271 181 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 MRE11P49959 708 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 ZNF132P52740 706 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 PDE4CQ08493 712 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 GOLGA8FQ08AF8 430 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 GOLGA8DPQ0D2H9 430 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 MTAPQ13126 283 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 CCINQ13939 588 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 STILQ15468 1287 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 ENOSF1Q7L5Y1 443 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 TADA2BQ86TJ2 420 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 ALYREFQ86V81 257 aaKnown RBP18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 CHFRQ96EP1 664 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 FAM81BQ96LP2 452 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 CDK5RAP1Q96SZ6 601 aaKnown RBP18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 PHOX2BQ99453 314 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 NMUR1Q9HB89 426 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 PRMT8Q9NR22 394 aaPredicted RBP18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 TBC1D14Q9P2M4 693 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 FBXO4Q9UKT5 387 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 SH3BP1Q9Y3L3 701 aa18.14■□□□□ 0.49
CHMP1A-208ENST00000550102 TRDMT1O14717 391 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 SCAMP3O14828 347 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 SP9P0CG40 484 aa18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 KRT5P13647 590 aa18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 BRD2P25440 801 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 ATP5C1P36542 298 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 GRSF1Q12849 480 aaKnown RBP eCLIP18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 EXOC3L4Q17RC7 722 aa18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 TMEM196Q5HYL7 178 aa18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 RAB41Q5JT25 222 aa18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 C10orf120Q5SQS8 335 aa18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 KLHDC10Q6PID8 442 aa18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 ZC3H14Q6PJT7 736 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 LCLAT1Q6UWP7 414 aa18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 MAML2Q8IZL2 1156 aaPredicted RBP18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 ARHGAP18Q8N392 663 aa18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 TFAP2BQ92481 460 aa18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 OTUB2Q96DC9 234 aa18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 LINC00597Q9H2U6 94 aa18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 UBE2TQ9NPD8 197 aaPredicted RBP18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 RBM12Q9NTZ6 932 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 OSER1Q9NX31 292 aa18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 CLIC5Q9NZA1 410 aa18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 APEX2Q9UBZ4 518 aa18.13■□□□□ 0.49
CHMP1A-208ENST00000550102 M0QYV0 167 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 ADH1CP00326 375 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 CYP17A1P05093 508 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 IRF1P10914 325 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 RALAP11233 206 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 RARGP13631 454 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 PRKCSHP14314 528 aaPredicted RBP18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 PLA2G4AP47712 749 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 CCR3P51677 355 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 TKTL1P51854 596 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 MFAP3P55082 362 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 ADIGQ0VDE8 80 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 PPP2R5DQ14738 602 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 ZNF528Q3MIS6 628 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 HSP90AA4PQ58FG1 418 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 CCDC183Q5T5S1 534 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 Q6ZS52 159 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 SCD5Q86SK9 330 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 SIX6OS1Q8N1H7 587 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 SYNPOQ8N3V7 929 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 P2RY13Q9BPV8 354 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 TUBGCP2Q9BSJ2 902 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 LRRC4Q9HBW1 653 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 DNMT3LQ9UJW3 386 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 CNTN6Q9UQ52 1028 aa18.12■□□□□ 0.49
CHMP1A-208ENST00000550102 KCNJ18B7U540 433 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 PROB1E7EW31 1015 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 RNF225M0QZC1 329 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 TULP2O00295 520 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 TBX18O95935 607 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 ZBED1O96006 694 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 CSTF1Q05048 431 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 KCNJ12Q14500 433 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 CNGA2Q16280 664 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 STX1AQ16623 288 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 PKDCCQ504Y2 493 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 FSTL4Q6MZW2 842 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms