RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 MKI67P46013 3256 aaKnown RBP12.68□□□□□ -0.38
CACNB3-213ENST00000550064 EFCAB8A8MWE9 144 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 SOAT2O75908 522 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 FGGP02679 453 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 LTFP02788 710 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 TFE3P19532 575 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-213ENST00000550064 IL1R2P27930 398 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 NOS2P35228 1153 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 MAGEA10P43363 369 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-213ENST00000550064 ITIH3Q06033 890 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 C2orf54Q08AI8 447 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 IFRD2Q12894 506 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-213ENST00000550064 DUSP4Q13115 394 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 NAA30Q147X3 362 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-213ENST00000550064 HADHQ16836 314 aaKnown RBP12.68□□□□□ -0.38
CACNB3-213ENST00000550064 LONRF2Q1L5Z9 754 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 MGAT5BQ3V5L5 792 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 DCAF6Q58WW2 860 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 C9orf50Q5SZB4 431 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 SEL1L2Q5TEA6 688 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 SYPL2Q5VXT5 272 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 RSRC2Q7L4I2 434 aaKnown RBP12.68□□□□□ -0.38
CACNB3-213ENST00000550064 POLNQ7Z5Q5 900 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 RCOR2Q8IZ40 523 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 NUP93Q8N1F7 819 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 NOA1Q8NC60 698 aaKnown RBP12.68□□□□□ -0.38
CACNB3-213ENST00000550064 SPATA4Q8NEY3 305 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 EXD1Q8NHP7 514 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 CENPIQ92674 756 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-213ENST00000550064 GOLGA1Q92805 767 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 ACSF2Q96CM8 615 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-213ENST00000550064 RPGRIP1Q96KN7 1286 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 TBCBQ99426 244 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 SEPT5Q99719 369 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-213ENST00000550064 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 POPDC2Q9HBU9 364 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 NGRNQ9NPE2 291 aaKnown RBP12.68□□□□□ -0.38
CACNB3-213ENST00000550064 KLHL11Q9NVR0 708 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 DDX56Q9NY93 547 aaKnown RBP12.68□□□□□ -0.38
CACNB3-213ENST00000550064 NAALADL1Q9UQQ1 740 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 NR2E3Q9Y5X4 410 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 PLXNA4Q9HCM2 1894 aa12.68□□□□□ -0.38
CACNB3-213ENST00000550064 LINC01553A4QN01 128 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 PI4K2BG5E9Z4 385 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 LILRB3O75022 631 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 ABLIM3O94929 683 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 ZRANB2O95218 330 aaKnown RBP eCLIP12.67□□□□□ -0.38
CACNB3-213ENST00000550064 KRT1P04264 644 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 KRT7P08729 469 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 DESP17661 470 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 DNAJB2P25686 324 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 BMPR1AP36894 532 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 SULT1E1P49888 294 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 HDAC4P56524 1084 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 USP46P62068 366 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 RPL10AP62906 217 aaKnown RBP12.67□□□□□ -0.38
CACNB3-213ENST00000550064 PITX1P78337 314 aaPredicted RBP12.67□□□□□ -0.38
CACNB3-213ENST00000550064 RAB33AQ14088 237 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 SHHQ15465 462 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 SLC25A52Q3SY17 297 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 TEX35Q5T0J7 233 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 ZFYVE27Q5T4F4 411 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 BSPRYQ5W0U4 402 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 SCYL2Q6P3W7 929 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 SLC13A5Q86YT5 568 aaPredicted RBP12.67□□□□□ -0.38
CACNB3-213ENST00000550064 GPR65Q8IYL9 337 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 STKLD1Q8NE28 680 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 ZNF461Q8TAF7 563 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 GPR152Q8TDT2 470 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 NT5C3BQ969T7 300 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 RNF25Q96BH1 459 aaPredicted RBP12.67□□□□□ -0.38
CACNB3-213ENST00000550064 SPATA17Q96L03 361 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 PEBP4Q96S96 227 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 NPY6RQ99463 290 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 NCAPGQ9BPX3 1015 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 AP1M1Q9BXS5 423 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 ZBP1Q9H171 429 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 RXFP1Q9HBX9 757 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 MRPL17Q9NRX2 175 aaKnown RBP12.67□□□□□ -0.38
CACNB3-213ENST00000550064 RBM12Q9NTZ6 932 aaKnown RBP12.67□□□□□ -0.38
CACNB3-213ENST00000550064 IL37Q9NZH6 218 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 STK39Q9UEW8 545 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 AFF4Q9UHB7 1163 aaKnown RBP12.67□□□□□ -0.38
CACNB3-213ENST00000550064 USP18Q9UMW8 372 aa12.67□□□□□ -0.38
CACNB3-213ENST00000550064 GREB1Q4ZG55 1949 aa12.66□□□□□ -0.38
CACNB3-213ENST00000550064 PLXNA3P51805 1871 aa12.66□□□□□ -0.38
CACNB3-213ENST00000550064 MYO16Q9Y6X6 1858 aa12.66□□□□□ -0.38
CACNB3-213ENST00000550064 GRXCR1A8MXD5 290 aa12.66□□□□□ -0.38
CACNB3-213ENST00000550064 KRIT1O00522 736 aa12.66□□□□□ -0.38
CACNB3-213ENST00000550064 CAPN9O14815 690 aa12.66□□□□□ -0.38
CACNB3-213ENST00000550064 PRPSAP2O60256 369 aa12.66□□□□□ -0.38
CACNB3-213ENST00000550064 ENDOD1O94919 500 aa12.66□□□□□ -0.38
CACNB3-213ENST00000550064 SEC24AO95486 1093 aa12.66□□□□□ -0.38
CACNB3-213ENST00000550064 RARAP10276 462 aa12.66□□□□□ -0.38
CACNB3-213ENST00000550064 CTSAP10619 480 aa12.66□□□□□ -0.38
CACNB3-213ENST00000550064 MYOGP15173 224 aa12.66□□□□□ -0.38
CACNB3-213ENST00000550064 CTNNB1P35222 781 aa12.66□□□□□ -0.38
CACNB3-213ENST00000550064 ATXN1P54253 815 aaKnown RBP12.66□□□□□ -0.38
CACNB3-213ENST00000550064 YWHAGP61981 247 aaKnown RBP eCLIP12.66□□□□□ -0.38
CACNB3-213ENST00000550064 LLGL1Q15334 1064 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms