RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 ARFIP2P53365 341 aa4.93□□□□□ -1.62
CNOT2-216ENST00000548939 BCAT1P54687 386 aa4.93□□□□□ -1.62
CNOT2-216ENST00000548939 ID2Q02363 134 aa4.93□□□□□ -1.62
CNOT2-216ENST00000548939 ZNF267Q14586 743 aaPredicted RBP4.93□□□□□ -1.62
CNOT2-216ENST00000548939 LARS2Q15031 903 aaKnown RBP4.93□□□□□ -1.62
CNOT2-216ENST00000548939 LEXMQ3ZCV2 418 aa4.93□□□□□ -1.62
CNOT2-216ENST00000548939 BRDTQ58F21 947 aaPredicted RBP4.93□□□□□ -1.62
CNOT2-216ENST00000548939 TMEM63BQ5T3F8 832 aa4.93□□□□□ -1.62
CNOT2-216ENST00000548939 ANO7Q6IWH7 933 aa4.93□□□□□ -1.62
CNOT2-216ENST00000548939 MEPCEQ7L2J0 689 aaKnown RBP4.93□□□□□ -1.62
CNOT2-216ENST00000548939 LIX1LQ8IVB5 337 aa4.93□□□□□ -1.62
CNOT2-216ENST00000548939 PCDH12Q9NPG4 1184 aa4.93□□□□□ -1.62
CNOT2-216ENST00000548939 AASDHPPTQ9NRN7 309 aa4.93□□□□□ -1.62
CNOT2-216ENST00000548939 TMEM184CQ9NVA4 438 aa4.93□□□□□ -1.62
CNOT2-216ENST00000548939 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.93□□□□□ -1.62
CNOT2-216ENST00000548939 COL4A3BPQ9Y5P4 624 aa4.93□□□□□ -1.62
CNOT2-216ENST00000548939 ABCA10Q8WWZ4 1543 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 PTPRGP23470 1445 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 A0A1W2PPL8 197 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 H3BNX3 289 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 TBC1D4O60343 1298 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 TLR2O60603 784 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 ALPLP05186 524 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 NCLP19338 710 aaKnown RBP4.92□□□□□ -1.62
CNOT2-216ENST00000548939 HTR1BP28222 390 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 DIO1P49895 249 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 TMTC4Q5T4D3 741 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 DEF8Q6ZN54 512 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 DCDC5Q6ZRR9 648 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 PIP4P1Q86T03 277 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 DAAM2Q86T65 1068 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 DENND1CQ8IV53 801 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 DNAJB14Q8TBM8 379 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 DIS3LQ8TF46 1054 aaKnown RBP4.92□□□□□ -1.62
CNOT2-216ENST00000548939 SLC12A5Q9H2X9 1139 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 SQORQ9Y6N5 450 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 ABCC2Q92887 1545 aa4.92□□□□□ -1.62
CNOT2-216ENST00000548939 TMEM233B4DJY2 109 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 AP1G1O43747 822 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 CT47B1P0C2W7 299 aaPredicted RBP4.91□□□□□ -1.62
CNOT2-216ENST00000548939 PSG1P11464 419 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 CREB1P16220 341 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 THBS3P49746 956 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 MTHFSP49914 203 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 NEK2P51955 445 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 SRSF1Q07955 248 aaKnown RBP eCLIP4.91□□□□□ -1.62
CNOT2-216ENST00000548939 SLC13A2Q13183 592 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 RAB32Q13637 225 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 SEC23BQ15437 767 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 RANBP10Q6VN20 620 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 ANKRD13BQ86YJ7 626 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 LINC01465Q8N7H1 131 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 MAFAQ8NHW3 353 aaPredicted RBP4.91□□□□□ -1.62
CNOT2-216ENST00000548939 SPATA3Q8NHX4 192 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 CTHRC1Q96CG8 243 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 HS6ST2Q96MM7 605 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 NT5C1BQ96P26 610 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 MGAT4CQ9UBM8 478 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 HEY2Q9UBP5 337 aa4.91□□□□□ -1.62
CNOT2-216ENST00000548939 EPRSP07814 1512 aaKnown RBP4.91□□□□□ -1.62
CNOT2-216ENST00000548939 MADDQ8WXG6 1647 aa4.9□□□□□ -1.62
CNOT2-216ENST00000548939 MAP3K4Q9Y6R4 1608 aa4.9□□□□□ -1.62
CNOT2-216ENST00000548939 CUL7Q14999 1698 aa4.9□□□□□ -1.62
CNOT2-216ENST00000548939 SRGAP2O75044 1071 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 CRYABP02511 175 aaKnown RBP4.9□□□□□ -1.63
CNOT2-216ENST00000548939 KITP10721 976 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 EPHA3P29320 983 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 ME1P48163 572 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 RPS13P62277 151 aaKnown RBP4.9□□□□□ -1.63
CNOT2-216ENST00000548939 CFHR1Q03591 330 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 KCNB1Q14721 858 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 VSTM1Q6UX27 236 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 C9orf47Q6ZRZ4 202 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 PIM3Q86V86 326 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.9□□□□□ -1.633e-6■■■□□ 15.2
CNOT2-216ENST00000548939 C16orf71Q8IYS4 520 aaPredicted RBP4.9□□□□□ -1.63
CNOT2-216ENST00000548939 ACRBPQ8NEB7 543 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 HOOK2Q96ED9 719 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 LYZL4Q96KX0 146 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 VN1R3Q9BXE9 311 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 DPH1Q9BZG8 443 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 GABBR1Q9UBS5 961 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 MAFFQ9ULX9 164 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 CDY1Q9Y6F8 540 aa4.9□□□□□ -1.63
CNOT2-216ENST00000548939 ADAMTSL3P82987 1691 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 CACNA1IQ9P0X4 2223 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 RUSC2Q8N2Y8 1516 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 PRR23D1E9PI22 279 aaPredicted RBP4.89□□□□□ -1.63
CNOT2-216ENST00000548939 H3BML4 177 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 SPRY2O43597 315 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 RGS10O43665 173 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 TMPRSS11DO60235 418 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 CNOT3O75175 753 aaKnown RBP4.89□□□□□ -1.63
CNOT2-216ENST00000548939 UBXN7O94888 489 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 RASAL1O95294 804 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 PRR23D2P0DMB1 279 aaPredicted RBP4.89□□□□□ -1.63
CNOT2-216ENST00000548939 CTSAP10619 480 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 UQCRC1P31930 480 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 THBS4P35443 961 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 CC2D1BQ5T0F9 858 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms