RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 FAM84AQ96KN4 292 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 HSPA12BQ96MM6 686 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 GABRG3Q99928 467 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 MRPL44Q9H9J2 332 aaKnown RBP14.4□□□□□ -0.1
CDX2-202ENST00000548877 TMEM30AQ9NV96 361 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 APOBEC2Q9Y235 224 aaKnown RBP14.4□□□□□ -0.1
CDX2-202ENST00000548877 NME7Q9Y5B8 376 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 PCDHB9Q9Y5E1 797 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 SCAMP3O14828 347 aaKnown RBP14.39□□□□□ -0.11
CDX2-202ENST00000548877 TACC1O75410 805 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 ZNF883P0CG24 379 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 NDUFV2P19404 249 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 ALCAMQ13740 583 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 SURF1Q15526 300 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 PLEKHG6Q3KR16 790 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 BTBD8Q5XKL5 378 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 DBX2Q6ZNG2 339 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 METTL3Q86U44 580 aaKnown RBP14.39□□□□□ -0.11
CDX2-202ENST00000548877 SLCO6A1Q86UG4 719 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 MIB1Q86YT6 1006 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 OR5B17Q8NGF7 314 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 IPO4Q8TEX9 1081 aaKnown RBP14.39□□□□□ -0.11
CDX2-202ENST00000548877 FOXJ1Q92949 421 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 ANKRD36BP1Q96IX9 119 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 BBC3Q96PG8 261 aaPredicted RBP14.39□□□□□ -0.11
CDX2-202ENST00000548877 CBWD1Q9BRT8 395 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 ELOVL4Q9GZR5 314 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 SPHK2Q9NRA0 654 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 IL37Q9NZH6 218 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 STK17AQ9UEE5 414 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 PCDHB13Q9Y5F0 798 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 ASXL3Q9C0F0 2248 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 PTPRJQ12913 1337 aa14.39□□□□□ -0.11
CDX2-202ENST00000548877 FAM92AA1XBS5 289 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 FRMD3A2A2Y4 597 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 GFRA2O00451 464 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 COCHO43405 550 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 RTN3O95197 1032 aaPredicted RBP14.38□□□□□ -0.11
CDX2-202ENST00000548877 PDGFRBP09619 1106 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 ZDHHC11BP0C7U3 371 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 GNSP15586 552 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 YWHAQP27348 245 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 GNL1P36915 607 aaPredicted RBP14.38□□□□□ -0.11
CDX2-202ENST00000548877 CACNA2D1P54289 1103 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 DUOXA2Q1HG44 320 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 MDH1BQ5I0G3 518 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 C10orf76Q5T2E6 689 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 SYCP2LQ5T4T6 812 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 DYMQ7RTS9 669 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 TMPRSS7Q7RTY8 843 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 TMEM25Q86YD3 366 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 NUP93Q8N1F7 819 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 GPD1LQ8N335 351 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 NAT16Q8N8M0 369 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 BAHD1Q8TBE0 780 aaPredicted RBP14.38□□□□□ -0.11
CDX2-202ENST00000548877 COL26A1Q96A83 441 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 CACNA2D2Q9NY47 1150 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 PCOLCE2Q9UKZ9 415 aa14.38□□□□□ -0.11
CDX2-202ENST00000548877 R3HCC1Q9Y3T6 440 aaKnown RBP14.38□□□□□ -0.11
CDX2-202ENST00000548877 ASH1LQ9NR48 2969 aaKnown RBP14.37□□□□□ -0.11
CDX2-202ENST00000548877 GOLGA8IPA6NC78 632 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 GOLGA8JA6NMD2 632 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 ZBTB24O43167 697 aaPredicted RBP14.37□□□□□ -0.11
CDX2-202ENST00000548877 CACNG3O60359 315 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 ABL1P00519 1130 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 PTPN1P18031 435 aaKnown RBP14.37□□□□□ -0.11
CDX2-202ENST00000548877 CASP5P51878 434 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 GRIK2Q13002 908 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 WDR45BQ5MNZ6 344 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 HECTD3Q5T447 861 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 EGFLAMQ63HQ2 1017 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 BBS7Q8IWZ6 715 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 PNPLA1Q8N8W4 532 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 RASSF8Q8NHQ8 419 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 MDM1Q8TC05 714 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 MRGPRX1Q96LB2 322 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 ACOX2Q99424 681 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 MRPL45Q9BRJ2 306 aaKnown RBP14.37□□□□□ -0.11
CDX2-202ENST00000548877 COMMD8Q9NX08 183 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 MARK1Q9P0L2 795 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 CYP8B1Q9UNU6 501 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 SH3BP1Q9Y3L3 701 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 BPTFQ12830 3046 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 FLNBO75369 2602 aaKnown RBP14.37□□□□□ -0.11
CDX2-202ENST00000548877 CABIN1Q9Y6J0 2220 aa14.37□□□□□ -0.11
CDX2-202ENST00000548877 A0A1B0GTW7 788 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 TRIM24O15164 1050 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 GREM1O60565 184 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 GCNT3O95395 438 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 TNNC2P02585 160 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 GRAMD4Q6IC98 578 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 SDE2Q6IQ49 451 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 HTR3DQ70Z44 454 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 WDR49Q8IV35 697 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 RGL4Q8IZJ4 473 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 SYCP3Q8IZU3 236 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 GLIS3Q8NEA6 775 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 CADM4Q8NFZ8 388 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 B3GNT5Q9BYG0 378 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 ZNF518BQ9C0D4 1074 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms