RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 CXCL16Q9H2A7 254 aa6.89□□□□□ -1.31
CASC18-202ENST00000548557 MTIF3Q9H2K0 278 aaKnown RBP6.89□□□□□ -1.31
CASC18-202ENST00000548557 SLITRK6Q9H5Y7 841 aa6.89□□□□□ -1.31
CASC18-202ENST00000548557 OCEL1Q9H607 264 aa6.89□□□□□ -1.31
CASC18-202ENST00000548557 OSGEPQ9NPF4 335 aa6.89□□□□□ -1.31
CASC18-202ENST00000548557 FANCFQ9NPI8 374 aa6.89□□□□□ -1.31
CASC18-202ENST00000548557 SIX4Q9UIU6 781 aa6.89□□□□□ -1.31
CASC18-202ENST00000548557 TTC7AQ9ULT0 858 aaPredicted RBP6.89□□□□□ -1.31
CASC18-202ENST00000548557 CITO14578 2027 aa6.89□□□□□ -1.31
CASC18-202ENST00000548557 RALGAPA2Q2PPJ7 1873 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 TET1Q8NFU7 2136 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 ANKRD65E5RJM6 399 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 EBAG9O00559 213 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 PIRO00625 290 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 MUSKO15146 869 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 BUB1BO60566 1050 aaPredicted RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 DGKIO75912 1065 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 KRT19P08727 400 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 ACRP10323 421 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 FGFR1P11362 822 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 P4HA1P13674 534 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 HSD17B3P37058 310 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 HALP42357 657 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 MASP1P48740 699 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 MFAP3P55082 362 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 MYL6P60660 151 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 PDCLQ13371 301 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 HLTFQ14527 1009 aaKnown RBP eCLIP6.88□□□□□ -1.31
CASC18-202ENST00000548557 SKIDA1Q1XH10 827 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 ZNF699Q32M78 642 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 C9orf57Q5W0N0 161 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 ZNF365Q70YC5 407 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 DDX42Q86XP3 938 aaKnown RBP eCLIP6.88□□□□□ -1.31
CASC18-202ENST00000548557 PDCD7Q8N8D1 485 aaKnown RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 TTC8Q8TAM2 541 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 SLC35G2Q8TBE7 412 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 PHOSPHO2Q8TCD6 241 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 MGARPQ8TDB4 240 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 RFFLQ8WZ73 363 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 SEC14L1Q92503 715 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 C18orf25Q96B23 403 aaPredicted RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 LRRC45Q96CN5 670 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 RSRC1Q96IZ7 334 aaKnown RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 ZNF560Q96MR9 790 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 CASD1Q96PB1 797 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 MAK16Q9BXY0 300 aaKnown RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 XYLT2Q9H1B5 865 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 NEUROG2Q9H2A3 272 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 TMBIM4Q9HC24 238 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 RNF19AQ9NV58 838 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 MIOSQ9NXC5 875 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 UBAP1Q9NZ09 502 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 TUBGCP4Q9UGJ1 667 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 AMFRQ9UKV5 643 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 AGAP1Q9UPQ3 857 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 PLAAQ9Y263 795 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 TTC3P53804 2025 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 SCN5AQ14524 2016 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 C2orf81A6NN90 581 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 H0YGN5 161 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 DDX3YO15523 660 aaKnown RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 MAP3K7O43318 606 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 POMCP01189 267 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 SYN1P17600 705 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 NR1D1P20393 614 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 POLR2BP30876 1174 aaKnown RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 ATP1A2P50993 1020 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 AFF1P51825 1210 aaKnown RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 NEK3P51956 506 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 NOP14P78316 857 aaKnown RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 RNASELQ05823 741 aaKnown RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 SOX4Q06945 474 aaPredicted RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 DSC1Q08554 894 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 UAP1Q16222 522 aaPredicted RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 ZNF667Q5HYK9 610 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 TMEM240Q5SV17 173 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 LVRNQ6Q4G3 990 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 OTOP2Q7RTS6 562 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 PPM1KQ8N3J5 372 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 TTC39CQ8N584 583 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 KCT2Q8NC54 265 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 CCDC26Q8TAB7 109 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 HERVK_113Q902F9 699 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 HPDLQ96IR7 371 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 FAM193BQ96PV7 902 aaPredicted RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 FAM107BQ9H098 131 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 UBE2TQ9NPD8 197 aaPredicted RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 TBC1D13Q9NVG8 400 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 AMACRQ9UHK6 382 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 ZMYND8Q9ULU4 1186 aaPredicted RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 BARX2Q9UMQ3 279 aaPredicted RBP6.88□□□□□ -1.31
CASC18-202ENST00000548557 TMEM98Q9Y2Y6 226 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 NFS1Q9Y697 457 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 ALPK3Q96L96 1907 aa6.88□□□□□ -1.31
CASC18-202ENST00000548557 ANK1P16157 1881 aa6.87□□□□□ -1.31
CASC18-202ENST00000548557 BTF3P20290 206 aaKnown RBP6.87□□□□□ -1.31
CASC18-202ENST00000548557 TAF6P49848 677 aa6.87□□□□□ -1.31
CASC18-202ENST00000548557 TSPY1Q01534 308 aa6.87□□□□□ -1.31
CASC18-202ENST00000548557 UPP1Q16831 310 aa6.87□□□□□ -1.31
CASC18-202ENST00000548557 WDR72Q3MJ13 1102 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms