RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 ACO1P21399 889 aaKnown RBP10.04□□□□□ -0.8
USP15-208ENST00000548524 TBXAS1P24557 533 aaPredicted RBP10.04□□□□□ -0.8
USP15-208ENST00000548524 NBL1P41271 181 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 GCGRP47871 477 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 SLC8A3P57103 927 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 CSTF1Q05048 431 aaKnown RBP10.04□□□□□ -0.8
USP15-208ENST00000548524 GRSF1Q12849 480 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP15-208ENST00000548524 MTAPQ13126 283 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 NR1H3Q13133 447 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 FZD5Q13467 585 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 PPP2R5DQ14738 602 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 DGKKQ5KSL6 1271 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 PPP1R26Q5T8A7 1209 aaPredicted RBP10.04□□□□□ -0.8
USP15-208ENST00000548524 ZC3H14Q6PJT7 736 aaKnown RBP10.04□□□□□ -0.8
USP15-208ENST00000548524 CLEC20AQ6ZU45 233 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 DDX42Q86XP3 938 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP15-208ENST00000548524 SLC4A11Q8NBS3 891 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 GBP4Q96PP9 640 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 DUSP16Q9BY84 665 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 RNF38Q9H0F5 515 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 CHRDQ9H2X0 955 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 ECT2Q9H8V3 914 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 PNPLA8Q9NP80 782 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 TLR8Q9NR97 1041 aaKnown RBP10.04□□□□□ -0.8
USP15-208ENST00000548524 RBM12Q9NTZ6 932 aaKnown RBP10.04□□□□□ -0.8
USP15-208ENST00000548524 IL37Q9NZH6 218 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 CFAP97Q9P2B7 532 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 RWDD2AQ9UIY3 292 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 FBXO4Q9UKT5 387 aa10.04□□□□□ -0.8
USP15-208ENST00000548524 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP15-208ENST00000548524 SLC9A3R1O14745 358 aaPredicted RBP10.03□□□□□ -0.8
USP15-208ENST00000548524 PMM2O15305 246 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 COCHO43405 550 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 GFRA3O60609 400 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 OLFM2O95897 454 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 CD19P15391 556 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 CCR3P51677 355 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 RAD23BP54727 409 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 KCNH2Q12809 1159 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 TPD52L1Q16890 204 aaPredicted RBP10.03□□□□□ -0.8
USP15-208ENST00000548524 EML3Q32P44 896 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 SNX30Q5VWJ9 437 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 ARHGAP17Q68EM7 881 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 GPRIN1Q7Z2K8 1008 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 TRIM59Q8IWR1 403 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 KMT2EQ8IZD2 1858 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 PPM1KQ8N3J5 372 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 MLKLQ8NB16 471 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 NKD2Q969F2 451 aaPredicted RBP10.03□□□□□ -0.8
USP15-208ENST00000548524 NUP62CLQ9H1M0 184 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 LINC00597Q9H2U6 94 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 CCSER2Q9H7U1 834 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 HESX1Q9UBX0 185 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 SCML2Q9UQR0 700 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 SH3BP1Q9Y3L3 701 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 PCDHB4Q9Y5E5 795 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 R4GN57 208 aa10.03□□□□□ -0.8
USP15-208ENST00000548524 COL4A3Q01955 1670 aa10.02□□□□□ -0.8
USP15-208ENST00000548524 FAM92AA1XBS5 289 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 OTOL1A6NHN0 477 aaPredicted RBP10.02□□□□□ -0.81
USP15-208ENST00000548524 HHLA1C9JL84 531 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 PROB1E7EW31 1015 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 GOLGA6L22H0YM25 854 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 SCAMP3O14828 347 aaKnown RBP10.02□□□□□ -0.81
USP15-208ENST00000548524 CYP26A1O43174 497 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 TLR5O60602 858 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 ZDHHC11BP0C7U3 371 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 IRF1P10914 325 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 VDRP11473 427 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 GJA4P35212 333 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 CXCL12P48061 93 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 TUBP50607 506 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 MARSP56192 900 aaKnown RBP10.02□□□□□ -0.81
USP15-208ENST00000548524 ZXDBP98169 803 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 GOLGA7BQ2TAP0 167 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 ZNF528Q3MIS6 628 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 SGO2Q562F6 1265 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 TSSK4Q6SA08 328 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 TMEM270Q6UE05 265 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 MAML2Q8IZL2 1156 aaPredicted RBP10.02□□□□□ -0.81
USP15-208ENST00000548524 SYNPOQ8N3V7 929 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 ANKRD52Q8NB46 1076 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 EHBP1Q8NDI1 1231 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 CNOT6LQ96LI5 555 aaKnown RBP10.02□□□□□ -0.81
USP15-208ENST00000548524 P2RY13Q9BPV8 354 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 DACH1Q9UI36 760 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 ZDBF2Q9HCK1 2354 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 ZNF318Q5VUA4 2279 aa10.02□□□□□ -0.81
USP15-208ENST00000548524 WDFY4Q6ZS81 3184 aa10.01□□□□□ -0.81
USP15-208ENST00000548524 A0A1W2PQH9 124 aa10.01□□□□□ -0.81
USP15-208ENST00000548524 TRDMT1O14717 391 aaKnown RBP10.01□□□□□ -0.81
USP15-208ENST00000548524 RALAP11233 206 aa10.01□□□□□ -0.81
USP15-208ENST00000548524 RARGP13631 454 aa10.01□□□□□ -0.81
USP15-208ENST00000548524 DRD1P21728 446 aa10.01□□□□□ -0.81
USP15-208ENST00000548524 ATP5C1P36542 298 aaKnown RBP10.01□□□□□ -0.81
USP15-208ENST00000548524 MTIF2P46199 727 aaKnown RBP10.01□□□□□ -0.81
USP15-208ENST00000548524 GALK1P51570 392 aa10.01□□□□□ -0.81
USP15-208ENST00000548524 KIF11P52732 1056 aa10.01□□□□□ -0.81
USP15-208ENST00000548524 BCAT1P54687 386 aa10.01□□□□□ -0.81
USP15-208ENST00000548524 GOLGA8FQ08AF8 430 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms