RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, human

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCD1-204	ENST00000547637	BCKDHB	P21953	392 aa		24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	CASP1	P29466	404 aa		24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	P2RY2	P41231	377 aa		24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	KIR2DL1	P43626	348 aa	Predicted RBP	24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	CASP4	P49662	377 aa		24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	RESP18	Q5W5W9	173 aa		24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	SDE2	Q6IQ49	451 aa		24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	FOXD4L3	Q6VB84	417 aa	Predicted RBP	24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	SCARA5	Q6ZMJ2	495 aa		24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	ACOT1	Q86TX2	421 aa		24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	UNC93A	Q86WB7	457 aa		24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	SLC9A9	Q8IVB4	645 aa		24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	ZNF513	Q8N8E2	541 aa	Predicted RBP	24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	HMGB4	Q8WW32	186 aa		24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	XPO6	Q96QU8	1125 aa	Known RBP	24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	IL37	Q9NZH6	218 aa		24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	EVL	Q9UI08	416 aa	Predicted RBP	24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	FRMD4B	Q9Y2L6	1034 aa		24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	MYH10	P35580	1976 aa		24.43	■■□□□ 1.5
SMARCD1-204	ENST00000547637	MAP1B	P46821	2468 aa	Known RBP	24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	TCRBV21S2A2	A0A5A6	115 aa		24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	LRRIQ3	A6PVS8	624 aa	Predicted RBP	24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	HOXC11	O43248	304 aa	Predicted RBP	24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	KIF20A	O95235	890 aa		24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	ZSCAN22	P10073	491 aa	Predicted RBP	24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	CEACAM1	P13688	526 aa		24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	CLDN10	P78369	228 aa		24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	EMC10	Q5UCC4	262 aa		24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	C12orf40	Q86WS4	652 aa		24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	NAT16	Q8N8M0	369 aa		24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	RLN3	Q8WXF3	142 aa		24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	BACH2	Q9BYV9	841 aa		24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	CCSER2	Q9H7U1	834 aa		24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	KRT82	Q9NSB4	513 aa		24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	GMIP	Q9P107	970 aa		24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	LSM7	Q9UK45	103 aa	Known RBP	24.42	■■□□□ 1.5
SMARCD1-204	ENST00000547637	IKBKB	O14920	756 aa		24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	AP5Z1	O43299	807 aa		24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	F13A1	P00488	732 aa		24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	SLFN14	P0C7P3	912 aa		24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	CSRP1	P21291	193 aa	Known RBP	24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	ATP5C1	P36542	298 aa	Known RBP	24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	IRX4	P78413	519 aa		24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	TRIM61	Q5EBN2	209 aa		24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	SH3PXD2A	Q5TCZ1	1133 aa		24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	SLC36A4	Q6YBV0	504 aa		24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	SYT12	Q8IV01	421 aa		24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	HSCB	Q8IWL3	235 aa		24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	CCDC47	Q96A33	483 aa	Known RBP	24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	IMPG2	Q9BZV3	1241 aa		24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	GZF1	Q9H116	711 aa	Predicted RBP	24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	24.41	■■□□□ 1.5
SMARCD1-204	ENST00000547637	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	FAM92A	A1XBS5	289 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	PDXK	O00764	312 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	TLR5	O60602	858 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	TULP3	O75386	442 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	ZDHHC11B	P0C7U3	371 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	UAP1L1	Q3KQV9	507 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	C10orf76	Q5T2E6	689 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	PAQR9	Q6ZVX9	377 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	RABEPK	Q7Z6M1	372 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	BBS7	Q8IWZ6	715 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	TMEFF1	Q8IYR6	380 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	FUK	Q8N0W3	1084 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	CRYBG2	Q8N1P7	616 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	TMC2	Q8TDI7	906 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	TMEM174	Q8WUU8	243 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	SNX21	Q969T3	373 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	ZFR	Q96KR1	1074 aa	Known RBP	24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	SLC32A1	Q9H598	525 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	DMAC2	Q9NW81	257 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	WDR35	Q9P2L0	1181 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	USP25	Q9UHP3	1055 aa		24.4	■■□□□ 1.5
SMARCD1-204	ENST00000547637	CALU	O43852	315 aa	Predicted RBP	24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	MYL1	P05976	194 aa		24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	FAM200B	P0CF97	657 aa		24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	IRF1	P10914	325 aa		24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	HOXD12	P35452	270 aa		24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	NDST1	P52848	882 aa		24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	ATXN3	P54252	364 aa	Predicted RBP	24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	MAP3K7CL	P57077	242 aa		24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	ZNF252P-AS1	Q0IIN9	211 aa		24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	ZACN	Q401N2	412 aa		24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	LYSMD4	Q5XG99	296 aa		24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	TADA2B	Q86TJ2	420 aa		24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	ETFBKMT	Q8IXQ9	262 aa		24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	TERB1	Q8NA31	727 aa		24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	CEP76	Q8TAP6	659 aa		24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	SLC2A14	Q8TDB8	520 aa		24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	SERTAD1	Q9UHV2	236 aa		24.39	■■□□□ 1.49
SMARCD1-204	ENST00000547637	GON4L	Q3T8J9	2241 aa		24.38	■■□□□ 1.49
SMARCD1-204	ENST00000547637	PATE3	B3GLJ2	98 aa		24.38	■■□□□ 1.49
SMARCD1-204	ENST00000547637	HNRNPL	P14866	589 aa	Known RBP eCLIP	24.38	■■□□□ 1.49
SMARCD1-204	ENST00000547637	NTSR1	P30989	418 aa		24.38	■■□□□ 1.49
SMARCD1-204	ENST00000547637	STK4	Q13043	487 aa		24.38	■■□□□ 1.49
SMARCD1-204	ENST00000547637	CEP135	Q66GS9	1140 aa		24.38	■■□□□ 1.49
SMARCD1-204	ENST00000547637	GRAMD4	Q6IC98	578 aa		24.38	■■□□□ 1.49
SMARCD1-204	ENST00000547637	HTR3D	Q70Z44	454 aa		24.38	■■□□□ 1.49

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms