RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 FAM153CQ494X1 144 aa7.12□□□□□ -1.27
NPAS3-204ENST00000546849 VRK3Q8IV63 474 aa7.12□□□□□ -1.27
NPAS3-204ENST00000546849 P3H2Q8IVL5 708 aa7.12□□□□□ -1.27
NPAS3-204ENST00000546849 FAM71BQ8TC56 605 aa7.12□□□□□ -1.27
NPAS3-204ENST00000546849 SLC9A6Q92581 669 aa7.12□□□□□ -1.27
NPAS3-204ENST00000546849 GDF15Q99988 308 aa7.12□□□□□ -1.27
NPAS3-204ENST00000546849 CHMP4AQ9BY43 222 aa7.12□□□□□ -1.27
NPAS3-204ENST00000546849 KRTAP17-1Q9BYP8 105 aa7.12□□□□□ -1.27
NPAS3-204ENST00000546849 MYLK2Q9H1R3 596 aa7.12□□□□□ -1.27
NPAS3-204ENST00000546849 ARHGEF3Q9NR81 526 aa7.12□□□□□ -1.27
NPAS3-204ENST00000546849 HS3ST3A1Q9Y663 406 aa7.12□□□□□ -1.27
NPAS3-204ENST00000546849 ADM5C9JUS6 153 aa7.11□□□□□ -1.27
NPAS3-204ENST00000546849 SYT5O00445 386 aa7.11□□□□□ -1.27
NPAS3-204ENST00000546849 FZD7O75084 574 aa7.11□□□□□ -1.27
NPAS3-204ENST00000546849 USP1O94782 785 aa7.11□□□□□ -1.27
NPAS3-204ENST00000546849 PDIA3P30101 505 aaKnown RBP7.11□□□□□ -1.27
NPAS3-204ENST00000546849 TIRAPP58753 221 aa7.11□□□□□ -1.27
NPAS3-204ENST00000546849 TMTC4Q5T4D3 741 aa7.11□□□□□ -1.27
NPAS3-204ENST00000546849 HECTD2Q5U5R9 776 aa7.11□□□□□ -1.27
NPAS3-204ENST00000546849 DENND2CQ68D51 928 aa7.11□□□□□ -1.27
NPAS3-204ENST00000546849 CRIP3Q6Q6R5 217 aa7.11□□□□□ -1.27
NPAS3-204ENST00000546849 PEG10Q86TG7 708 aaKnown RBP7.11□□□□□ -1.27
NPAS3-204ENST00000546849 SIRT6Q8N6T7 355 aa7.11□□□□□ -1.27
NPAS3-204ENST00000546849 RUBCNQ92622 972 aa7.11□□□□□ -1.27
NPAS3-204ENST00000546849 TRIM36Q9NQ86 728 aa7.11□□□□□ -1.27
NPAS3-204ENST00000546849 DKK3Q9UBP4 350 aa7.11□□□□□ -1.27
NPAS3-204ENST00000546849 RIMKLBQ9ULI2 386 aa7.11□□□□□ -1.27
NPAS3-204ENST00000546849 SLC27A6Q9Y2P4 619 aa7.11□□□□□ -1.27
NPAS3-204ENST00000546849 TRIM38O00635 465 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 CES2O00748 559 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 NPC1O15118 1278 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 LMNAP02545 664 aaKnown RBP7.1□□□□□ -1.27
NPAS3-204ENST00000546849 ITGA2BP08514 1039 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 NPPBP16860 134 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 AKT1P31749 480 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 GRIA3P42263 894 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 POLE2P56282 527 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 EIF4A1P60842 406 aaKnown RBP7.1□□□□□ -1.27
NPAS3-204ENST00000546849 ATP1A4Q13733 1029 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 PRKG1Q13976 671 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 CLCA4Q14CN2 919 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 ERCC6LQ2NKX8 1250 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 ABLIM2Q6H8Q1 611 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 KLHL17Q6TDP4 642 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 BEND2Q8NDZ0 799 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 STYXQ8WUJ0 223 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 RSPRY1Q96DX4 576 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 EPS8L2Q9H6S3 715 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 TMEM8AQ9HCN3 771 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 IGSF9Q9P2J2 1179 aa7.1□□□□□ -1.27
NPAS3-204ENST00000546849 ACKR2O00590 384 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 FCHO1O14526 889 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 KIAA0355O15063 1070 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 TNFRSF6BO95407 300 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 NPSP0C0P6 89 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 TMEM225BP0DP42 221 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 ARP10275 920 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 ENGP17813 658 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 CYP2C18P33260 490 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 GSTM5P46439 218 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 SEC24CP53992 1094 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 PTK2BQ14289 1009 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 TBC1D25Q3MII6 688 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 INO80DQ53TQ3 878 aaPredicted RBP7.09□□□□□ -1.27
NPAS3-204ENST00000546849 TLDC1Q6P9B6 456 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 DPY19L3Q6ZPD9 716 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 RFX8Q6ZV50 586 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 PARS2Q7L3T8 475 aaKnown RBP7.09□□□□□ -1.27
NPAS3-204ENST00000546849 WDR53Q7Z5U6 358 aaPredicted RBP7.09□□□□□ -1.27
NPAS3-204ENST00000546849 CCDC117Q8IWD4 279 aaPredicted RBP7.09□□□□□ -1.27
NPAS3-204ENST00000546849 RP9Q8TA86 221 aaKnown RBP7.09□□□□□ -1.27
NPAS3-204ENST00000546849 TRAPPC12Q8WVT3 735 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 LINC00476Q8WZB0 136 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 HAPLN3Q96S86 360 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 PRRX2Q99811 253 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 AGO4Q9HCK5 861 aaKnown RBP7.09□□□□□ -1.27
NPAS3-204ENST00000546849 SNX15Q9NRS6 342 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 VPS51Q9UID3 782 aa7.09□□□□□ -1.27
NPAS3-204ENST00000546849 PNMA6EA0A0J9YXQ4 647 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 ZAR1LA6NP61 321 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 VWC2LB2RUY7 222 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 J3KTA2 159 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 WDR47O94967 919 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 ERBB2P04626 1255 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 CREB1P16220 341 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 TNFRSF1AP19438 455 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 DRD1P21728 446 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 GKP32189 559 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 E2F1Q01094 437 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 CSHL1Q14406 222 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 TUBB8Q3ZCM7 444 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 ATPAF1Q5TC12 328 aaPredicted RBP7.08□□□□□ -1.28
NPAS3-204ENST00000546849 IGFL4Q6B9Z1 124 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 LAIR1Q6GTX8 287 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 NRSN1Q8IZ57 195 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 CACNA2D3Q8IZS8 1091 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 ABHD11Q8NFV4 315 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 WDR60Q8WVS4 1066 aa7.08□□□□□ -1.28
NPAS3-204ENST00000546849 LARP4BQ92615 738 aaKnown RBP7.08□□□□□ -1.28
NPAS3-204ENST00000546849 RFKQ969G6 155 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms